Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005963.1 Hibiscus syriacus cultivar Beakdansim tig00014009_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72544

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
700--1172
74
6.4
74
78
11
422
32
11
12
43
1.79
1677--1721
19
2.3
20
78
21
51
44
11
8
35
1.71
12595--12656
23
2.7
23
90
2
99
22
30
25
20
1.98
19625--19664
21
1.9
21
89
0
62
25
40
25
10
1.86
19694--19718
8
3.1
8
100
0
50
48
52
0
0
1.00
28136--28297
86
1.9
86
89
0
252
35
18
18
27
1.94
33825--33864
3
13.3
3
89
10
64
67
0
0
32
0.91
35488--35533
20
2.3
19
85
14
58
26
15
8
50
1.73
38783--38825
20
2.1
19
87
12
59
37
2
23
37
1.68
38924--39027
45
2.3
46
79
11
108
36
22
16
25
1.94
39012--39067
20
2.8
20
100
0
112
33
21
19
25
1.97
39859--39936
21
3.7
21
80
0
93
25
20
26
26
1.99
48504--48549
20
2.3
19
85
14
58
26
15
8
50
1.73
48760--49121
131
2.8
130
88
1
510
27
16
30
25
1.97
49218--49290
32
2.4
30
80
19
80
39
12
17
30
1.87
49243--49405
36
4.7
34
70
15
104
36
14
18
30
1.90
49381--49589
62
3.3
62
83
10
278
42
14
14
28
1.85
49667--49747
33
2.5
33
89
2
119
28
20
18
32
1.97
66839--66929
30
3.1
30
88
1
130
29
27
20
21
1.98
67916--67966
19
2.7
19
100
0
102
23
25
21
29
1.99
67935--68091
64
2.5
64
84
8
187
28
21
18
32
1.96
69503--69536
3
11.7
3
87
6
52
67
29
0
2
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70507--70615
22
4.9
22
72
19
75
62
0
4
32
1.22
70507--70589
22
3.8
22
79
10
82
63
0
4
31
1.15
70507--70589
42
1.9
45
82
7
109
63
0
4
31
1.15
70746--70782
3
12.3
3
88
11
58
64
0
0
35
0.94
70768--70811
24
1.9
24
86
9
65
65
2
6
25
1.28
70819--70856
10
4.1
9
83
16
51
65
0
0
34
0.93
70819--70863
23
2.0
23
86
8
65
64
0
0
35
0.94
71273--71362
37
2.4
37
85
5
119
33
11
15
40
1.83
71631--71705
36
2.1
36
100
0
150
33
22
17
26
1.96
72144--72544
106
3.8
106
92
3
672
21
18
26
33
1.97
72143--72544
210
1.9
208
92
4
684
21
19
26
33
1.97

Tables:   1

The End!