Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005976.1 Hibiscus syriacus cultivar Beakdansim tig00014049_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53733

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
783--810
13
2.2
13
100
0
56
64
14
7
14
1.48
2025--2070
19
2.4
19
85
0
56
26
26
4
43
1.73
5490--5614
31
4.0
31
95
0
223
35
17
19
28
1.94
6057--6104
19
2.5
19
89
0
69
20
16
12
50
1.78
7534--7587
20
2.7
20
94
0
99
14
29
3
51
1.60
29132--29159
7
4.0
7
100
0
56
42
0
28
28
1.56
43049--43121
33
2.2
32
85
7
101
21
5
8
64
1.41
43084--43187
47
2.3
44
80
11
122
20
4
8
66
1.37
43219--43253
13
2.6
14
90
4
54
20
0
11
68
1.20
45330--45489
63
2.5
63
87
4
225
23
20
35
21
1.96
45327--45489
21
7.8
21
83
6
188
23
19
36
20
1.95
46866--46913
19
2.5
20
75
3
53
29
14
6
50
1.67
48058--48097
21
1.9
22
90
10
66
17
10
35
37
1.83
48263--48447
21
8.7
21
79
10
198
22
20
36
21
1.95
48263--48426
64
2.5
64
94
1
283
21
20
35
21
1.96
50449--50494
6
7.3
6
88
9
65
60
0
39
0
0.97
50425--50494
12
5.4
13
80
11
65
55
0
44
0
0.99

Tables:   1

The End!