Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005980.1 Hibiscus syriacus cultivar Beakdansim tig00014057_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64291

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7974--8014
19
2.2
19
86
4
57
60
0
17
21
1.35
11995--12029
18
1.9
18
88
0
52
54
5
20
20
1.64
14392--14427
17
2.2
17
90
5
56
25
8
2
63
1.36
18176--18225
20
2.5
20
83
0
64
32
22
12
34
1.90
26920--26959
16
2.6
16
88
4
55
35
20
7
37
1.81
29758--29811
20
2.6
22
80
16
71
46
0
1
51
1.11
30157--30259
48
2.1
48
98
0
197
28
15
14
41
1.86
30371--30449
11
6.7
11
74
18
70
46
1
2
49
1.23
30414--30487
14
5.2
14
73
20
73
45
0
9
44
1.36
30402--30487
11
7.7
11
77
18
72
45
0
8
46
1.33
30396--30482
32
2.6
32
89
7
120
44
0
6
48
1.29
32188--32294
24
4.4
24
70
13
83
43
9
1
44
1.47
32246--32308
11
5.1
12
81
16
58
46
6
3
44
1.45
32246--32287
13
3.4
13
83
12
61
50
4
0
45
1.23
32536--32575
20
2.0
20
95
0
71
40
12
0
47
1.41
32536--32634
11
9.3
11
73
18
75
45
12
0
42
1.41
32517--32637
51
2.3
52
81
13
135
47
10
0
41
1.44
32588--32612
12
2.1
12
100
0
50
40
16
0
44
1.47
32536--32633
33
3.0
32
81
13
112
44
12
0
42
1.41
38036--38116
40
2.0
40
92
0
135
11
19
37
32
1.87
38188--38263
32
2.4
32
75
0
80
17
7
30
44
1.77
38973--39015
18
2.4
18
85
11
54
48
2
0
48
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39768--39804
2
18.5
2
100
0
74
51
0
0
48
1.00
41008--41043
17
2.1
17
89
0
54
38
0
0
61
0.96
44940--44968
14
2.0
15
93
6
51
65
6
20
6
1.40
47213--47449
42
5.7
42
70
16
154
32
16
21
30
1.95
47222--47473
82
3.1
79
80
10
274
32
15
21
31
1.94
47315--47495
84
2.2
82
80
4
193
34
16
20
28
1.94
48925--49062
44
3.3
42
78
5
152
34
25
14
26
1.94
51810--51842
17
2.0
17
94
5
59
18
12
3
66
1.36
53328--53380
21
2.5
21
82
11
72
41
20
35
1
1.64
53744--54053
43
7.2
43
83
2
214
33
25
20
21
1.97
53758--54053
86
3.4
86
84
1
353
34
25
19
20
1.96
53744--54053
129
2.4
129
81
0
350
33
25
20
21
1.97
55651--55685
3
11.3
3
87
6
52
31
0
2
65
1.07
56594--56738
60
2.4
60
80
6
161
33
22
4
40
1.73
62914--62946
2
16.5
2
100
0
66
48
0
0
51
1.00
64151--64217
22
3.0
22
73
4
62
31
25
25
17
1.97

Tables:   1

The End!