Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005986.1 Hibiscus syriacus cultivar Beakdansim tig00014074_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76193

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2071--2111
16
2.5
17
80
11
50
39
2
0
58
1.11
4735--4772
20
1.9
20
89
10
60
13
13
10
63
1.53
5054--5141
32
2.8
32
84
1
115
46
5
6
40
1.54
11324--11405
21
3.7
22
75
9
69
23
37
24
14
1.92
11321--11405
22
3.9
22
76
10
68
24
36
24
14
1.93
17172--17230
21
2.8
21
76
7
75
20
38
27
13
1.90
28216--28251
17
2.1
17
90
10
56
47
0
0
52
1.00
31242--31291
18
2.8
18
100
0
100
40
10
6
44
1.63
33171--33225
12
4.7
12
84
2
58
32
36
0
30
1.58
33171--33220
24
2.1
24
88
3
75
30
38
0
32
1.58
37870--37912
12
3.7
12
84
3
61
25
41
0
32
1.56
45466--45540
36
2.1
36
97
0
141
28
10
14
46
1.78
45894--45935
16
2.6
16
81
7
50
26
9
11
52
1.68
53589--53627
13
3.0
13
88
0
60
12
23
20
43
1.86
56710--56837
59
2.1
60
84
8
163
34
16
14
34
1.90
56710--56837
60
2.1
59
83
8
152
34
16
14
34
1.90
57614--57729
37
3.1
38
78
13
123
46
1
6
45
1.38
57593--57666
26
2.8
27
80
8
89
50
0
5
44
1.25
59824--60243
37
11.4
37
78
8
374
46
6
3
43
1.46
59883--60243
37
9.7
36
80
8
384
45
7
3
44
1.46
59824--60243
149
2.8
148
81
8
462
46
6
3
43
1.46
60435--60469
13
2.8
13
91
4
54
82
0
0
17
0.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62727--62783
3
19.7
3
81
13
66
68
1
0
29
1.00
62741--62806
27
2.4
27
85
5
80
69
3
1
25
1.11
62738--62807
28
2.4
28
81
9
79
70
2
1
25
1.10
63990--64051
3
20.0
3
86
6
88
62
0
0
37
0.95
66306--66365
20
3.0
20
87
2
77
33
10
20
36
1.86
66320--66375
20
2.8
20
86
0
67
35
12
19
32
1.89
66565--66604
20
1.9
22
90
10
66
37
40
10
12
1.77
66822--66886
34
1.9
33
90
3
103
29
16
29
24
1.97
67735--67776
6
7.0
6
81
8
50
78
2
0
19
0.86
67737--67771
17
2.1
17
88
0
52
80
2
0
17
0.84
67731--67783
19
2.8
20
71
23
53
75
1
0
22
0.90

Tables:   1

The End!