Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005987.1 Hibiscus syriacus cultivar Beakdansim tig00014077_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74046

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4404--4443
18
2.2
18
86
0
53
10
12
25
52
1.70
15307--15352
2
23.0
2
90
0
74
47
0
4
47
1.21
16498--16523
4
6.5
4
100
0
52
76
0
23
0
0.78
20517--20665
60
2.5
60
83
6
185
36
6
22
35
1.79
20637--20694
29
2.0
28
86
3
80
44
0
12
43
1.41
26441--26467
12
2.2
12
100
0
54
33
14
0
51
1.43
32608--32654
23
2.0
24
83
4
60
19
2
2
76
0.99
34504--34569
33
2.0
34
85
8
91
59
1
0
39
1.07
38868--38902
16
2.1
17
89
5
54
54
5
0
40
1.24
41632--42130
219
2.2
219
82
6
583
30
12
20
37
1.90
41632--42205
219
2.6
217
80
7
568
29
13
19
37
1.90
49406--49457
27
2.0
27
88
7
81
46
32
3
17
1.66
49459--49509
25
2.0
25
81
7
59
60
0
1
37
1.08
49447--49531
34
2.5
34
98
0
161
60
0
1
38
1.05
52181--52276
6
16.0
6
80
4
95
51
27
2
19
1.58
53161--53217
18
3.0
18
78
14
60
61
0
0
38
0.96
53172--53215
21
2.0
23
86
8
65
63
0
0
36
0.95
60896--60921
11
2.4
11
100
0
52
26
0
0
73
0.84

Tables:   1

The End!