Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000599.1 Hibiscus syriacus cultivar Beakdansim tig00001165_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68299

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3661--3712
3
17.3
3
95
0
95
36
0
0
63
0.95
3652--3722
9
7.6
10
88
6
73
40
0
0
59
0.98
4133--4157
11
2.3
11
100
0
50
88
0
12
0
0.53
5079--5132
26
2.1
26
85
0
72
44
0
0
55
0.99
5094--5132
12
3.1
12
79
13
51
38
0
0
61
0.96
17590--18065
83
5.7
83
96
1
857
27
14
21
36
1.92
18814--19536
112
6.5
112
93
2
1123
38
13
18
29
1.90
19872--19913
3
14.3
3
95
5
77
35
0
0
64
0.94
19863--19911
20
2.5
20
93
6
82
36
0
0
63
0.95
21318--21357
12
3.1
13
82
10
55
40
0
0
60
0.97
23532--23571
13
3.0
13
86
13
55
72
0
0
27
0.85
24977--25056
41
2.0
40
87
2
108
21
17
25
36
1.95
24984--25060
21
3.7
21
73
3
84
22
15
25
36
1.93
24984--25101
62
1.9
62
82
6
150
20
17
24
37
1.94
25049--25201
21
7.4
21
66
25
94
16
20
25
36
1.94
25046--25220
41
4.3
41
97
0
314
16
21
25
37
1.93
25218--25268
5
9.6
5
97
2
75
25
54
19
0
1.44
25766--25839
6
12.5
6
98
1
141
0
16
51
32
1.45
25942--26224
41
6.9
41
78
9
274
36
25
20
18
1.94
26007--26273
62
4.3
62
86
4
351
35
25
19
19
1.95
25942--26224
103
2.8
102
81
8
358
36
25
20
18
1.94
26134--26203
20
3.5
20
70
18
72
40
24
22
12
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26048--26277
21
11.1
21
70
13
86
35
26
18
19
1.95
31237--31283
22
2.0
24
84
8
62
34
2
4
59
1.29
32767--33463
197
3.5
198
83
6
845
38
14
15
31
1.88
33484--33531
23
2.1
23
84
0
60
37
14
8
39
1.76
33484--33646
87
1.9
87
89
0
254
34
12
9
43
1.75
33558--33609
23
2.3
23
79
0
59
32
19
7
40
1.80
34237--34285
23
2.1
23
84
0
62
22
18
2
57
1.51
39904--39972
33
2.0
33
86
5
93
31
10
20
37
1.86
39917--39996
33
2.5
33
83
4
101
33
8
17
40
1.81
41106--41151
18
2.6
17
83
10
56
34
4
2
58
1.30
48247--48281
12
2.9
12
95
0
61
45
0
48
5
1.26
48245--48284
12
3.5
11
86
6
53
45
0
50
5
1.23
51363--51396
18
1.9
18
94
5
61
38
11
11
38
1.79
51695--51745
15
3.5
15
76
10
61
23
9
17
49
1.77
51690--51760
28
2.5
28
95
0
124
28
11
15
45
1.80
52275--52320
17
2.7
17
96
0
83
26
17
26
30
1.97
61150--61207
22
2.5
23
81
18
68
25
6
22
44
1.77
61163--61189
13
2.1
13
100
0
54
22
7
22
48
1.75
64769--64857
21
4.5
19
76
12
81
52
3
2
41
1.30
65659--65695
14
2.6
15
87
8
51
32
2
2
62
1.23

Tables:   1

The End!