Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005994.1 Hibiscus syriacus cultivar Beakdansim tig00014108_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  139534

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--60
22
2.0
22
85
4
59
28
33
28
9
1.88
994--1117
31
4.0
31
77
11
110
29
17
20
31
1.96
1104--1206
30
3.4
30
94
0
170
23
20
23
33
1.97
2806--2864
31
1.9
30
86
13
84
38
18
20
22
1.93
5798--5833
14
2.4
15
90
9
56
22
0
8
69
1.15
8441--8475
2
17.5
2
88
11
54
48
0
2
48
1.16
12168--12226
31
1.9
31
86
6
84
37
18
22
22
1.94
15193--15223
14
2.1
15
94
5
55
25
0
6
67
1.14
17848--17883
2
17.5
2
94
5
63
47
0
2
50
1.15
21584--21642
31
1.9
31
86
6
84
37
18
22
22
1.94
24614--24644
14
2.1
15
94
5
55
25
0
6
67
1.14
31002--31060
31
1.9
31
86
6
84
37
18
22
22
1.94
34037--34067
14
2.1
15
94
5
55
25
0
6
67
1.14
36699--36731
2
16.5
2
87
12
50
48
0
3
48
1.17
40420--40478
31
1.9
31
86
6
84
37
18
22
22
1.94
43456--43486
14
2.1
15
94
5
55
25
0
6
67
1.14
49838--49896
31
1.9
31
86
6
84
37
18
22
22
1.94
56767--56814
24
2.0
25
91
4
80
39
4
0
56
1.19
59250--59308
31
1.9
31
86
6
84
37
18
22
22
1.94
62269--62299
14
2.1
15
94
5
55
25
0
6
67
1.14
67262--67329
30
2.3
30
94
0
118
23
16
39
20
1.91
70621--70671
2
25.5
2
92
7
86
49
0
1
49
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74344--74402
31
1.9
31
86
6
84
37
18
22
22
1.94
75959--75995
2
18.5
2
89
10
58
48
2
0
48
1.15
78617--78647
14
2.1
15
94
5
55
67
6
0
25
1.14
83282--83348
34
2.0
33
82
11
82
43
5
1
49
1.36
87518--87551
13
2.5
13
90
4
50
47
0
2
50
1.16
93128--93439
158
2.0
154
96
2
579
31
20
10
37
1.86
94230--94260
14
2.1
15
94
5
55
25
0
6
67
1.14
100587--100645
31
1.9
31
86
6
84
37
18
22
22
1.94
103616--103646
14
2.1
15
94
5
55
25
0
6
67
1.14
106272--106304
2
16.5
2
87
12
50
48
0
3
48
1.17
110001--110059
31
1.9
31
86
6
84
37
18
22
22
1.94
113033--113063
14
2.1
15
94
5
55
25
0
6
67
1.14
115690--115722
2
16.5
2
87
12
50
48
0
3
48
1.17
119420--119478
31
1.9
31
86
6
84
37
18
22
22
1.94
122454--122484
14
2.1
15
94
5
55
25
0
6
67
1.14
125107--125140
2
17.5
2
93
6
61
50
0
0
50
1.00
128837--128895
31
1.9
31
86
6
84
37
18
22
22
1.94
131875--131905
14
2.1
15
94
5
55
25
0
6
67
1.14
134531--134562
2
16.5
2
93
6
57
50
0
0
50
1.00
138254--138312
31
1.9
31
86
6
84
37
18
22
22
1.94

Tables:   1

The End!