Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005995.1 Hibiscus syriacus cultivar Beakdansim tig00014110_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33297

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--478
205
2.3
209
96
3
896
22
19
25
33
1.97
1--478
103
4.6
105
96
3
882
22
19
25
33
1.97
1254--1292
13
2.9
14
85
14
55
0
5
10
84
0.76
11755--11779
10
2.5
10
100
0
50
80
0
8
12
0.92
13526--13587
13
4.6
13
75
20
56
74
1
6
17
1.11
13526--13587
9
6.9
9
74
18
58
74
1
6
17
1.11
13845--13871
2
13.5
2
100
0
54
51
0
0
48
1.00
14128--14170
18
2.5
17
85
7
61
67
2
4
25
1.22
14552--14653
34
2.9
36
88
7
163
27
15
12
44
1.83
15201--16155
105
9.3
102
86
8
1230
22
18
26
32
1.97
15306--15484
92
2.0
87
86
7
243
25
16
26
31
1.96
15393--16155
205
3.7
204
93
3
1215
22
17
26
33
1.96
16759--16916
68
2.4
65
85
4
208
35
9
22
32
1.87
16760--16942
65
2.7
67
83
4
201
37
9
22
30
1.86
16892--17014
36
3.4
36
83
7
151
39
14
21
24
1.91
16903--17014
37
3.1
36
82
8
129
41
15
20
22
1.89
17995--18056
28
2.2
29
97
2
117
24
14
32
29
1.94
18672--18761
7
11.7
7
73
15
63
1
13
7
77
1.03
18686--18729
15
2.8
17
80
12
51
0
15
9
75
1.05
18694--18767
33
2.3
32
79
11
80
0
13
8
78
0.96
21812--21913
34
2.9
36
86
7
154
29
13
12
44
1.81
23217--23290
31
2.4
31
93
0
130
20
12
17
50
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24581--24655
31
2.4
31
88
0
105
53
13
9
24
1.68
26052--26136
2
42.5
2
97
0
161
50
0
0
49
1.00
28697--28923
117
1.9
117
82
7
282
54
3
11
29
1.55
28903--28963
29
2.1
29
87
6
88
47
14
13
24
1.80

Tables:   1

The End!