Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005997.1 Hibiscus syriacus cultivar Beakdansim tig00014132_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61434

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91--131
20
2.0
20
100
0
82
9
9
14
65
1.46
8--243
113
2.1
109
92
3
391
25
11
13
50
1.75
204--252
20
2.5
20
90
3
82
10
10
16
63
1.52
279--326
19
2.5
19
86
0
69
47
0
12
39
1.41
317--707
197
2.0
197
98
0
764
44
7
8
38
1.64
768--1119
92
3.8
92
90
1
521
29
13
13
43
1.82
1548--1620
28
2.6
28
74
6
78
49
1
1
47
1.18
1673--1907
87
2.7
88
86
5
343
34
13
9
42
1.77
1835--1894
23
2.6
23
78
0
66
33
18
8
40
1.80
11570--11616
22
2.1
23
92
4
78
40
25
10
23
1.87
13393--13445
15
3.5
15
73
0
52
11
62
15
11
1.55
31105--31132
14
2.0
14
100
0
56
50
7
0
42
1.30
37398--37442
18
2.5
17
79
10
54
60
0
2
37
1.09
38643--38673
16
1.9
16
100
0
62
6
12
22
58
1.58
38825--38890
27
2.4
27
87
0
96
34
1
18
45
1.59
39134--39174
18
2.2
19
86
4
57
48
9
17
24
1.76
41642--41834
84
2.3
84
98
1
370
43
4
11
40
1.61
44039--44073
18
1.9
18
94
0
61
37
0
0
62
0.95
58718--58742
11
2.3
11
100
0
50
84
0
0
16
0.63

Tables:   1

The End!