Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000600.1 Hibiscus syriacus cultivar Beakdansim tig00001167_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85379

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3067--3178
60
1.9
59
83
1
143
32
16
26
24
1.96
11232--11262
8
3.9
8
100
0
62
22
25
12
38
1.90
11333--11367
13
2.8
12
87
12
52
0
22
0
77
0.78
15204--15261
22
2.6
22
76
7
64
65
8
17
8
1.45
26564--26617
24
2.3
24
84
9
67
24
5
3
66
1.29
27878--28012
28
4.9
28
69
12
118
40
11
18
29
1.85
29436--29507
28
2.6
28
73
10
76
63
12
18
5
1.47
32134--32163
13
2.4
13
94
5
53
43
0
30
26
1.55
35557--35609
21
2.5
21
100
0
106
18
18
0
62
1.33
35864--35919
18
3.2
17
82
12
60
76
3
14
5
1.09
35865--35924
17
3.5
17
78
13
50
75
5
15
5
1.15
36592--36643
19
2.6
21
90
6
81
46
5
13
34
1.67
46356--46407
19
2.6
21
84
6
72
46
5
11
36
1.64
47360--47410
19
2.6
20
90
3
77
43
5
15
35
1.71
52893--52952
30
2.0
31
86
3
86
28
8
10
53
1.63
53486--53520
17
2.1
17
89
5
54
37
20
5
37
1.76
54327--54378
21
2.6
21
90
6
81
32
13
7
46
1.72
54789--54819
15
2.1
15
93
0
53
12
16
0
70
1.16
58453--58504
21
2.6
21
87
6
72
32
15
7
44
1.75
59625--59675
20
2.6
20
90
3
77
35
15
5
43
1.71
60407--60443
13
3.1
12
88
11
58
83
0
16
0
0.64
60394--60466
21
3.4
22
75
17
73
79
2
15
2
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60388--60480
42
2.3
40
80
12
102
77
3
16
3
1.03
62940--62999
30
2.0
31
86
3
86
28
8
10
53
1.63
63895--63945
19
2.6
20
90
3
77
35
13
7
43
1.73
68840--68920
35
2.3
35
80
14
96
29
2
37
30
1.71
72804--72872
33
2.1
33
83
5
86
31
1
36
30
1.67

Tables:   1

The End!