Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006004.1 Hibiscus syriacus cultivar Beakdansim tig00014157_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33245

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
220--281
24
2.6
24
86
0
88
22
25
22
29
1.99
876--1044
60
2.8
60
90
1
259
31
21
13
34
1.91
1079--1299
59
3.7
59
85
2
266
30
22
10
36
1.88
979--1299
118
2.7
117
80
7
326
29
22
10
37
1.88
3835--3875
21
2.0
21
90
0
64
31
24
19
24
1.98
5955--5989
18
1.9
18
88
0
52
25
31
20
22
1.98
6681--6709
2
14.5
2
100
0
58
51
0
0
48
1.00
9573--9619
2
23.5
2
100
0
94
51
0
0
48
1.00
16626--16898
93
2.9
93
83
1
314
35
19
9
35
1.84
16890--16930
2
20.5
2
100
0
82
51
0
0
48
1.00
18536--18576
20
2.0
21
85
4
57
39
26
7
26
1.82
23074--23333
83
3.1
82
78
4
272
35
16
15
33
1.90
23164--23297
42
3.2
41
69
15
121
35
19
16
29
1.94
24997--25060
2
32.0
2
100
0
128
50
0
0
50
1.00
26117--26187
36
2.0
36
88
5
108
38
15
12
33
1.85
30924--30977
28
1.9
28
84
0
72
33
9
27
29
1.88
31526--31621
33
2.8
34
84
9
149
34
16
13
35
1.88
31526--31623
36
2.8
36
87
6
157
34
16
13
35
1.87

Tables:   1

The End!