Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006007.1 Hibiscus syriacus cultivar Beakdansim tig00014165_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75876

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8421--8520
19
4.8
21
81
15
109
24
30
25
21
1.99
8420--8520
42
2.4
43
82
12
138
24
29
24
20
1.99
18783--18862
30
2.6
30
74
18
85
35
15
5
45
1.68
23364--23403
17
2.4
17
95
0
71
67
0
15
17
1.23
51027--51076
24
2.1
24
82
14
59
26
18
0
56
1.42
60778--60947
45
3.8
45
86
2
234
36
8
24
30
1.86
60778--60947
91
1.9
89
85
2
232
36
8
24
30
1.86
67258--67301
21
2.1
21
83
8
54
43
11
13
31
1.80
67752--67806
24
2.3
24
100
0
110
32
5
21
40
1.76
70812--70849
12
3.2
12
96
0
67
21
0
52
26
1.47
71521--71601
20
3.9
21
79
9
76
16
24
32
27
1.96

Tables:   1

The End!