Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006008.1 Hibiscus syriacus cultivar Beakdansim tig00014174_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93771

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9314--9448
61
2.2
64
84
6
170
27
18
27
26
1.98
26396--26449
21
2.6
22
83
13
62
35
1
12
50
1.52
28677--28704
12
2.3
12
100
0
56
7
60
7
25
1.48
29338--29378
21
2.0
21
85
9
57
36
2
9
51
1.48
29745--29783
15
2.6
15
87
0
51
41
2
7
48
1.45
30201--30254
23
2.3
24
87
3
74
50
16
24
9
1.74
43044--43195
77
1.9
79
84
2
200
41
8
5
44
1.57
45412--45639
112
2.0
111
89
0
348
28
15
19
35
1.93
47496--47671
46
3.8
46
88
0
253
26
15
13
44
1.84
47677--47774
49
2.0
49
81
0
115
30
22
15
31
1.95
48024--48383
54
6.7
54
86
2
483
34
15
11
38
1.84
48022--48383
161
2.2
162
87
2
541
34
15
11
38
1.84
53685--54485
81
9.9
81
89
1
1122
36
11
20
31
1.88
61130--61223
41
2.3
41
81
3
118
36
25
7
30
1.84
70555--70590
10
3.6
10
84
0
54
86
0
11
2
0.68
73763--73807
17
2.6
17
96
0
81
55
0
13
31
1.38
76522--76574
24
2.2
24
96
0
97
32
5
41
20
1.76
85108--85205
41
2.4
41
91
0
151
35
19
10
34
1.86
90989--91030
21
2.0
21
100
0
84
33
19
4
42
1.72
91061--91148
40
2.3
36
73
17
88
36
26
7
29
1.85
91069--91146
40
2.0
40
89
5
122
34
26
8
29
1.87

Tables:   1

The End!