Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006014.1 Hibiscus syriacus cultivar Beakdansim tig00014182_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70747

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2752--2778
12
2.2
12
100
0
54
29
33
14
22
1.94
4086--4122
2
18.5
2
100
0
74
51
0
0
48
1.00
6919--6952
18
1.9
17
88
5
50
44
0
20
35
1.52
7807--7935
59
2.2
59
87
0
186
28
17
24
29
1.97
8036--8164
43
2.9
44
93
5
217
37
6
23
32
1.82
9117--9265
45
3.3
45
83
3
176
36
12
23
26
1.91
16246--16351
45
2.4
45
90
0
158
24
32
19
23
1.98
17284--17326
20
2.2
20
91
0
68
30
30
20
18
1.97
19194--19231
18
2.1
18
85
9
51
36
2
5
55
1.37
20074--20111
16
2.4
16
100
0
76
28
10
28
31
1.90
23234--23273
18
2.1
18
86
9
53
40
0
2
57
1.12
23242--23285
17
2.4
18
85
14
56
36
2
4
56
1.32
23622--23698
24
3.4
23
71
20
72
35
16
14
33
1.89
34903--34946
20
2.2
20
80
15
56
13
15
0
70
1.17
45125--45167
20
2.1
21
87
8
63
13
16
0
69
1.19

Tables:   1

The End!