Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006015.1 Hibiscus syriacus cultivar Beakdansim tig00014185_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33311

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8208--8282
15
5.3
15
72
25
74
78
0
13
8
0.95
8224--8274
20
2.6
19
85
14
77
78
0
11
9
0.97
8209--8280
20
3.9
19
78
18
73
77
0
13
8
0.98
8200--8282
26
3.1
25
86
11
112
78
0
13
8
0.96
9157--9494
136
2.5
136
91
2
533
35
17
22
24
1.95
9443--9562
35
3.4
35
100
0
240
43
13
22
20
1.87
9807--9855
3
16.7
3
87
4
73
36
0
2
61
1.08
11203--11235
15
2.2
16
89
10
52
27
0
3
69
1.03
11797--12014
49
4.4
49
95
0
373
28
7
11
51
1.65
12083--12205
51
2.4
51
95
0
219
30
4
9
55
1.53
11896--12263
191
1.9
187
88
3
549
29
7
13
48
1.70
13928--14025
50
2.0
50
95
0
178
45
12
8
33
1.71
15383--15417
11
3.2
11
91
0
52
68
2
0
28
1.04
18935--18977
2
21.5
2
100
0
86
48
0
0
51
1.00
19574--19619
23
2.0
22
87
4
65
41
6
8
43
1.61
23174--23233
3
20.7
3
81
13
72
33
1
0
65
1.03

Tables:   1

The End!