Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006017.1 Hibiscus syriacus cultivar Beakdansim tig00014193_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82314

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19161--19299
36
3.9
36
96
0
251
25
17
15
41
1.89
27192--27325
36
3.8
36
92
1
225
25
17
14
41
1.88
29729--29782
20
2.7
20
91
2
72
20
24
12
42
1.87
29738--29782
20
2.2
20
96
0
81
20
26
13
40
1.89
40692--40752
6
10.2
6
96
0
104
31
49
16
3
1.62
40750--40803
5
10.8
5
95
0
81
14
38
40
5
1.70
46667--46705
6
6.5
6
100
0
78
33
51
15
0
1.44
46707--46770
5
12.8
5
90
6
85
15
39
39
6
1.73
47288--47357
36
2.0
35
85
2
95
34
11
2
51
1.53
47368--47440
36
2.0
36
86
0
101
46
35
0
17
1.49
47421--47450
13
2.2
14
94
5
53
56
33
0
10
1.32
48638--48676
17
2.3
17
90
0
60
69
2
5
23
1.21
52392--52435
17
2.6
16
79
10
52
70
2
25
2
1.10
59701--59766
27
2.4
27
89
0
105
45
12
6
36
1.66
67987--68086
41
2.4
41
83
0
128
38
24
6
32
1.79
68035--68372
41
8.3
41
83
1
410
35
21
10
33
1.87
68000--68727
123
6.0
123
76
10
606
36
19
10
32
1.87
68433--68727
41
7.2
41
85
5
373
35
18
12
33
1.89
68508--68756
123
2.0
123
82
4
306
38
18
12
30
1.87
76744--77034
41
7.2
41
81
7
339
34
20
12
33
1.90
76754--77034
119
2.3
122
82
7
342
34
19
12
33
1.90

Tables:   1

The End!