Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006019.1 Hibiscus syriacus cultivar Beakdansim tig00014199_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38380

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12229--12275
20
2.3
20
100
0
94
31
8
21
38
1.83
14412--14822
207
2.0
207
98
0
788
27
13
23
35
1.92
17491--17519
2
14.5
2
100
0
58
48
0
0
51
1.00
17585--17627
2
21.5
2
100
0
86
48
0
0
51
1.00
17631--17679
16
3.1
16
82
11
57
38
2
4
55
1.31
17643--17696
9
5.8
10
78
20
55
38
1
1
57
1.20
18564--18695
26
4.9
26
71
14
97
38
11
14
35
1.82
18547--18721
82
2.1
81
96
1
323
40
9
14
36
1.79
18740--18790
26
1.9
27
88
4
77
33
9
13
43
1.77
18631--18843
95
2.3
94
93
0
354
36
7
14
40
1.75
18842--18910
31
2.2
32
78
5
77
33
14
7
44
1.73
19582--19628
12
3.7
12
81
15
58
46
17
19
17
1.84
21915--21954
21
1.9
21
94
0
71
30
15
7
47
1.72
21949--22047
33
3.0
33
94
1
164
32
7
15
45
1.73
22033--22087
13
4.2
13
75
13
58
34
3
12
49
1.59
22483--22538
15
3.6
15
79
9
67
32
12
12
42
1.80
22502--22535
18
1.9
18
94
5
61
38
11
11
38
1.79
24148--24207
3
21.0
3
83
10
81
36
1
0
61
1.06
24149--24214
34
1.9
34
87
6
98
39
1
0
59
1.07
25762--25821
3
20.0
3
92
0
102
35
1
0
63
1.05
31263--31294
15
2.1
15
94
0
55
25
18
9
46
1.79
33157--33183
13
2.1
13
100
0
54
18
7
44
29
1.77

Tables:   1

The End!