Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000602.1 Hibiscus syriacus cultivar Beakdansim tig00001171_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61885

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15866--15993
18
7.4
17
76
10
107
45
9
11
33
1.73
15839--15992
52
2.9
52
80
5
150
44
10
11
33
1.75
15839--15996
70
2.3
69
80
8
169
44
10
11
33
1.75
15839--15993
35
4.4
35
80
8
138
44
10
11
33
1.75
16497--16539
18
2.4
18
100
0
86
39
18
16
25
1.91
24370--24395
2
13.0
2
100
0
52
50
0
0
50
1.00
24767--24818
21
2.5
21
87
0
77
50
1
9
38
1.46
25885--26080
36
5.4
36
89
0
293
15
23
22
37
1.93
28457--28499
20
2.2
20
86
0
59
37
20
11
30
1.89
31529--31602
29
2.5
29
82
4
76
63
2
1
32
1.17
32533--32564
16
1.9
17
93
6
57
12
3
15
68
1.32
41206--41307
47
2.2
46
88
8
147
39
7
9
43
1.67
41224--41317
47
2.0
46
88
8
138
43
7
8
40
1.63
59055--59143
39
2.2
42
82
8
103
51
2
2
43
1.26
59270--59299
2
15.5
2
93
6
53
53
0
0
46
1.00
59268--59301
15
2.3
15
100
0
68
52
0
0
47
1.00
59272--59297
13
2.0
13
100
0
52
53
0
0
46
1.00

Tables:   1

The End!