Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006020.1 Hibiscus syriacus cultivar Beakdansim tig00014208_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77585

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1423--1465
22
2.0
21
86
4
59
25
2
0
72
0.97
1500--1556
23
2.4
23
85
2
78
45
42
8
3
1.52
9503--9679
90
2.0
89
92
1
291
37
11
6
44
1.68
13282--13374
46
2.0
46
97
0
177
21
7
17
53
1.68
13293--13365
23
3.2
23
62
27
55
19
8
16
56
1.65
14462--14496
15
2.3
15
100
0
70
28
20
28
22
1.98
14645--14698
23
2.3
23
87
6
83
53
9
9
27
1.63
16475--16544
22
3.3
21
70
16
63
50
2
4
42
1.37
18653--18697
22
2.0
23
84
16
60
71
4
2
22
1.15
18686--18721
16
2.2
17
90
5
56
66
2
5
25
1.27
39553--39592
17
2.4
16
84
8
53
10
20
2
67
1.31
57948--58006
31
1.9
31
83
10
77
45
10
20
23
1.81
57958--58022
29
2.2
31
83
10
82
43
10
21
24
1.84
62751--62776
3
8.7
3
100
0
52
69
30
0
0
0.89
65550--65593
22
2.0
21
82
4
52
63
4
13
18
1.46
71507--71534
7
4.0
7
100
0
56
42
0
14
42
1.45
73563--73619
16
3.8
16
75
17
50
64
5
0
29
1.15
73571--73624
22
2.5
21
82
8
63
64
5
0
29
1.16
74278--74331
24
2.3
22
77
20
56
37
0
5
57
1.22

Tables:   1

The End!