Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006021.1 Hibiscus syriacus cultivar Beakdansim tig00014209_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70452

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7232--7276
23
1.9
24
86
4
65
40
15
13
31
1.86
14668--14708
17
2.4
17
95
0
73
56
19
14
9
1.66
20171--20354
45
4.2
45
79
6
198
26
24
14
34
1.94
22623--22910
141
2.1
139
81
8
334
28
12
18
41
1.86
25638--25717
40
2.0
40
85
0
106
21
26
25
27
1.99
39049--39084
16
2.3
16
90
4
56
47
0
0
52
1.00
38958--39135
90
2.0
90
92
0
293
44
5
10
39
1.62
40744--40801
23
2.5
23
100
0
116
32
27
12
27
1.92
45659--45871
81
2.6
82
90
2
322
17
4
34
42
1.70
52250--52364
57
1.9
59
83
13
148
56
8
7
26
1.57
53603--53660
27
2.1
27
90
0
89
36
1
10
51
1.46
54177--54224
25
2.0
25
83
4
62
41
6
8
43
1.60
55748--55795
24
2.0
25
87
4
71
45
2
10
41
1.50
63619--63683
25
2.5
26
95
2
114
36
0
35
27
1.57
64018--64072
22
2.5
22
100
0
110
16
40
23
20
1.91
66797--66833
17
2.2
17
90
0
56
67
0
0
32
0.91
68440--68496
25
2.2
25
84
12
71
64
1
1
31
1.13
68439--68484
3
15.0
3
81
4
56
63
2
2
32
1.19
68440--68481
16
2.7
16
85
3
50
64
2
2
30
1.19
68735--68791
17
3.2
18
68
26
57
15
22
12
49
1.78
68732--68800
36
1.9
36
97
2
131
17
21
13
47
1.81
68736--68822
36
2.3
36
90
5
129
19
21
14
43
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68764--69121
112
3.2
112
86
2
477
28
18
14
37
1.91
69028--69191
73
2.2
73
84
0
202
32
17
17
32
1.93
68949--69303
186
1.9
186
85
0
494
30
17
15
36
1.91
69101--69605
112
4.5
113
94
2
878
29
16
14
39
1.88

Tables:   1

The End!