Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006030.1 Hibiscus syriacus cultivar Beakdansim tig00014234_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82170

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8316--8341
11
2.4
11
100
0
52
42
15
0
42
1.47
20161--20187
13
2.1
13
100
0
54
37
7
0
55
1.28
21445--21473
2
14.5
2
100
0
58
51
0
0
48
1.00
26129--26188
29
2.1
29
96
0
111
26
28
16
28
1.97
31150--31211
32
1.9
32
83
6
81
32
16
20
30
1.95
51786--51858
31
2.3
31
97
2
137
13
36
10
38
1.80
52883--52956
39
2.0
37
81
7
87
50
10
12
27
1.73
54361--54399
14
2.8
13
88
3
51
15
12
10
61
1.56
59307--59341
18
1.9
18
88
0
52
2
17
2
77
1.02
62056--62096
2
21.0
2
95
5
75
51
0
0
48
1.00
62256--62317
13
4.7
14
88
7
87
33
19
17
29
1.95
62533--62562
11
2.7
11
89
0
51
53
23
10
13
1.69
62570--62614
23
2.0
23
81
0
54
42
15
15
26
1.87
62678--62707
11
2.6
12
94
5
53
46
36
16
0
1.47
62678--62707
6
5.2
6
92
8
53
46
36
16
0
1.47
64561--64683
65
1.9
64
81
3
147
52
7
12
28
1.65
65016--65125
12
8.8
13
66
16
54
3
65
0
30
1.16
65030--65079
22
2.2
22
86
10
66
8
58
0
34
1.28
65053--65122
26
2.7
26
88
4
97
2
64
1
31
1.17
74566--74647
36
2.3
36
80
0
92
31
23
20
24
1.98
74903--74934
17
1.9
16
93
6
55
59
6
12
21
1.55

Tables:   1

The End!