Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006035.1 Hibiscus syriacus cultivar Beakdansim tig00014245_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53782

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2076--2127
26
2.0
26
88
0
77
26
17
26
28
1.97
5710--5766
28
2.0
28
100
0
114
31
24
24
19
1.98
13506--13538
2
17.0
2
93
6
59
51
0
0
48
1.00
14131--14175
13
3.5
13
84
0
54
33
17
13
35
1.89
15551--15576
10
2.6
10
100
0
52
53
23
15
7
1.67
15815--15872
20
2.7
22
79
15
68
36
1
24
37
1.66
19256--19292
14
2.6
14
100
0
74
8
18
29
43
1.79
21685--21717
16
1.9
18
88
11
52
45
9
9
36
1.68
25669--25751
15
6.3
15
65
30
64
42
22
0
34
1.54
25673--25739
24
2.8
24
97
0
125
38
22
0
38
1.54
31881--31915
18
1.9
18
88
0
52
37
8
2
51
1.47
32266--32322
29
1.9
30
85
3
80
15
15
21
47
1.82
35355--35419
31
2.1
31
91
5
105
46
13
21
18
1.84
37048--37078
15
2.1
15
93
0
53
58
25
3
12
1.50
40245--40305
33
1.9
31
83
6
77
36
3
0
60
1.13
40232--40308
29
2.6
29
75
19
79
37
2
0
59
1.11
43011--43047
18
2.1
18
100
0
74
43
21
13
21
1.87
49454--49533
12
6.9
12
74
14
55
36
2
1
60
1.18
52232--52264
3
11.7
3
87
12
52
63
0
0
36
0.95
52235--52264
8
3.6
8
95
4
51
63
0
0
36
0.95

Tables:   1

The End!