Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006038.1 Hibiscus syriacus cultivar Beakdansim tig00014258_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87292

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10415--10467
22
2.5
21
82
11
65
47
18
16
16
1.83
10505--10552
20
2.4
20
85
0
69
37
20
18
22
1.94
17625--17794
44
3.9
44
89
0
268
27
20
11
40
1.87
21542--21718
44
4.0
44
89
0
246
28
19
11
41
1.85
35261--35309
6
8.2
6
93
0
80
2
16
44
36
1.59
54012--54049
10
3.8
10
86
6
51
78
2
18
0
0.86
55086--55415
56
5.9
56
90
0
489
35
17
11
36
1.85
62481--63183
135
5.2
135
83
1
779
30
23
16
29
1.96
62481--63183
270
2.6
270
84
2
916
30
23
16
29
1.96
63352--63437
3
29.0
3
97
2
165
33
0
0
66
0.92
68055--68138
31
2.7
32
76
9
82
39
19
14
27
1.90
69121--69167
18
2.6
18
80
6
51
51
12
2
34
1.52
70235--70278
2
22.0
2
100
0
88
50
0
0
50
1.00
73650--73732
43
1.9
43
90
0
130
40
19
21
18
1.91
83547--83572
11
2.4
11
100
0
52
38
7
0
53
1.30

Tables:   1

The End!