Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000604.1 Hibiscus syriacus cultivar Beakdansim tig00001173_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  104974

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6480--6552
36
2.0
36
82
10
87
46
2
2
47
1.31
9149--9176
6
4.7
6
100
0
56
50
0
32
17
1.47
12941--12966
2
13.0
2
100
0
52
50
0
0
50
1.00
15550--15591
21
2.1
20
91
8
68
42
4
4
47
1.45
19475--19518
2
22.0
2
100
0
88
50
0
0
50
1.00
19914--20363
226
2.0
220
88
8
667
27
12
20
39
1.88
35080--35117
13
3.1
13
85
14
62
76
0
0
23
0.79
35080--35117
11
3.3
11
92
7
58
76
0
0
23
0.79
36143--36186
20
2.2
20
87
0
61
45
6
20
27
1.76
37634--37722
34
2.7
31
81
6
97
40
0
1
58
1.05
37863--37916
17
3.2
17
72
0
54
31
0
3
64
1.11
39501--39591
21
4.3
21
82
8
114
21
29
24
24
1.99
39502--39591
42
2.1
42
93
0
153
22
28
24
24
1.99
40112--40218
34
3.1
34
87
0
151
56
4
2
36
1.35
40614--41218
128
4.7
128
94
0
1061
33
20
24
21
1.97
40614--41218
255
2.4
255
94
1
1068
33
20
24
21
1.97
41299--41339
8
5.2
8
82
5
57
36
29
0
34
1.58
49759--49822
2
32.0
2
100
0
128
50
0
0
50
1.00
51244--51469
124
1.8
122
81
10
280
57
4
8
28
1.50
53277--53747
105
4.5
105
98
0
890
22
16
25
35
1.95
63954--63997
20
2.2
20
88
8
63
72
2
6
18
1.17
64997--65049
26
2.1
26
85
3
72
77
0
5
16
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65010--65064
29
1.9
29
85
3
76
74
1
3
20
1.06
65285--65321
19
1.9
19
89
10
58
67
0
5
27
1.12
67122--67146
2
12.5
2
100
0
50
48
0
0
52
1.00
68069--68094
2
13.0
2
100
0
52
50
0
0
50
1.00
74336--74391
25
2.2
26
84
12
73
46
3
1
48
1.30
74664--74700
2
18.5
2
100
0
74
51
0
0
48
1.00
75327--75360
17
1.9
17
88
5
50
32
0
2
64
1.08
75323--75373
18
2.7
19
76
17
52
39
0
1
58
1.09
77977--78012
12
3.0
12
87
0
54
30
0
2
66
1.06
79831--79915
29
3.0
28
81
3
100
16
38
29
15
1.89
80118--80205
29
3.0
29
84
0
104
11
30
37
20
1.88
85761--85888
63
2.0
63
96
0
238
40
15
5
38
1.71
102215--102239
2
12.5
2
100
0
50
0
48
0
52
1.00

Tables:   1

The End!