Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006041.1 Hibiscus syriacus cultivar Beakdansim tig00014263_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61564

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1475--1524
19
2.7
19
96
3
93
22
20
28
30
1.98
3426--3484
23
2.7
22
82
7
75
30
18
23
27
1.98
3426--3502
21
3.5
23
81
6
81
32
16
22
28
1.96
8852--8897
22
2.0
24
87
8
69
23
4
0
71
1.03
9175--9213
20
1.9
21
84
5
53
12
10
2
74
1.17
9190--9221
13
2.3
15
89
10
50
15
9
0
75
1.05
12745--12794
21
2.4
21
90
6
75
48
24
18
10
1.78
15489--15553
32
2.0
32
96
0
121
35
4
33
26
1.77
22085--22126
22
2.0
21
90
4
66
28
4
0
66
1.12
22154--22191
2
20.5
2
84
15
55
47
0
0
52
1.00
22154--22191
12
3.1
13
88
11
62
47
0
0
52
1.00
22153--22216
31
2.1
31
83
16
80
42
3
1
53
1.26
22154--22216
12
4.6
14
77
22
55
42
3
1
52
1.27
22294--22358
5
12.8
5
71
9
51
13
3
6
76
1.09
40287--40336
15
3.4
16
81
15
63
22
10
12
56
1.65
47106--47161
24
2.3
24
81
0
67
37
21
23
17
1.94
47143--47198
23
2.4
23
76
5
60
33
30
21
14
1.93

Tables:   1

The End!