Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006046.1 Hibiscus syriacus cultivar Beakdansim tig00014298_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34575

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--116
31
3.7
31
93
2
196
40
12
15
31
1.85
12030--12072
20
2.3
19
80
11
52
23
27
6
41
1.80
14367--14397
11
2.7
11
95
5
53
74
0
9
16
1.07
17487--17552
34
1.9
34
96
0
123
16
15
13
54
1.71
22804--22862
31
1.9
31
100
0
118
44
6
6
42
1.57
25724--25805
41
2.0
41
92
0
137
35
12
10
41
1.78
30583--30635
10
6.1
10
68
31
50
58
22
11
7
1.57
30587--30635
16
3.1
16
100
0
98
57
24
12
6
1.58
31652--31685
14
2.4
14
80
0
50
52
23
11
11
1.70
34335--34369
6
6.0
6
86
6
54
17
37
0
45
1.48
34335--34366
11
2.8
11
95
4
55
15
37
0
46
1.46
34337--34369
17
1.9
17
93
0
57
18
36
0
45
1.49

Tables:   1

The End!