Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000605.1 Hibiscus syriacus cultivar Beakdansim tig00001175_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52342

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2132--2193
32
1.9
32
96
0
115
33
9
17
38
1.83
16622--16654
11
3.0
11
87
12
50
36
0
0
63
0.95
16939--17045
36
2.9
37
74
16
116
28
14
17
39
1.90
16950--17065
36
3.3
35
73
13
110
25
15
18
40
1.90
16925--17065
72
2.0
72
87
2
203
26
15
19
39
1.91
18477--18543
34
1.9
34
82
14
84
20
11
17
49
1.79
20123--20169
17
2.8
17
96
0
85
57
0
0
42
0.98
21323--21412
45
2.0
45
93
0
153
51
21
6
21
1.70
22964--23064
42
2.4
41
81
3
130
29
22
23
23
1.99
22717--23695
214
4.5
216
90
2
1441
32
19
16
32
1.93
23733--23921
36
5.1
37
87
5
231
18
19
20
41
1.91
23733--23921
73
2.6
72
82
4
234
18
19
20
41
1.91
31529--31570
17
2.5
17
92
0
66
59
0
2
38
1.10
32750--32839
45
2.0
45
100
0
180
51
20
6
22
1.70
35086--35200
3
38.3
3
100
0
230
66
0
0
33
0.92
35411--35753
129
2.6
129
83
5
397
27
16
20
34
1.95
35411--35779
131
2.8
130
82
3
341
28
16
20
34
1.94
36907--37441
45
11.9
45
87
0
624
38
20
17
23
1.93
36901--37446
179
3.0
180
83
1
666
38
19
17
23
1.93
38946--39085
8
16.2
9
75
18
54
4
22
0
72
1.01
38968--39034
8
8.8
8
73
15
61
2
20
0
76
0.92
38986--39086
13
7.8
13
77
14
84
4
20
0
74
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38971--39086
37
3.1
36
78
9
117
4
21
0
74
0.99
38945--39089
9
16.7
9
70
21
57
4
22
0
73
1.01

Tables:   1

The End!