Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006051.1 Hibiscus syriacus cultivar Beakdansim tig00014313_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56337

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14427--14507
30
2.6
32
81
12
107
41
3
4
49
1.42
14428--14519
30
3.1
28
82
14
105
45
4
4
45
1.43
14428--14536
28
3.7
28
82
11
94
44
6
4
44
1.50
14634--14714
31
2.8
28
77
15
83
45
8
4
40
1.56
14641--14721
30
2.7
30
77
5
92
48
7
3
40
1.49
14902--14943
2
21.0
2
100
0
84
50
0
0
50
1.00
22799--22867
34
2.0
34
100
0
138
46
14
10
28
1.77
23064--23097
2
17.0
2
93
0
59
47
0
2
50
1.16
26139--26208
36
2.0
34
94
5
122
47
17
5
30
1.70
30710--30789
36
2.3
35
87
6
117
45
20
5
30
1.72
33171--33230
31
1.9
31
93
0
102
41
6
15
36
1.73
39215--39259
18
2.3
21
85
11
60
20
2
6
71
1.20
39263--39316
22
2.5
21
82
8
65
35
3
5
55
1.41
43104--43229
60
2.1
60
83
2
155
34
15
15
34
1.88
47178--47223
21
2.1
22
88
4
67
50
4
15
30
1.63
53828--53865
18
2.1
19
85
5
51
39
0
0
60
0.97
53812--53864
23
2.3
23
81
15
65
35
1
0
62
1.06

Tables:   1

The End!