Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006054.1 Hibiscus syriacus cultivar Beakdansim tig00014325_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80829

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3241--3283
2
22.0
2
95
4
79
51
0
0
48
1.00
3989--4029
21
2.0
21
95
0
73
26
21
19
31
1.97
6180--6225
24
1.9
24
82
8
58
39
0
2
58
1.10
9960--10019
31
1.9
31
83
6
77
23
16
28
31
1.96
10651--10694
23
1.9
23
86
9
63
27
0
9
63
1.24
14062--14101
3
13.3
3
94
0
71
32
35
0
32
1.58
20976--21098
58
2.1
59
96
1
230
34
9
20
35
1.85
23043--23117
23
3.2
23
83
7
71
49
0
1
49
1.09
23098--23180
27
3.1
27
74
19
75
49
1
2
46
1.22
23098--23211
54
2.1
54
84
9
144
47
0
1
50
1.17
25744--25769
5
5.2
5
100
0
52
80
0
19
0
0.71
30292--30378
35
2.5
34
77
18
90
55
8
8
28
1.58
30373--30447
34
2.2
34
80
15
84
62
14
2
20
1.43
30922--30984
33
1.9
33
86
0
90
22
17
41
19
1.90
32735--32776
17
2.4
19
80
15
54
64
2
0
33
1.07
32737--32797
24
2.6
23
72
25
56
65
1
0
32
1.02
36184--36221
15
2.5
15
95
0
67
42
23
13
21
1.88
39455--39976
51
9.8
51
83
7
487
30
26
14
29
1.95
39487--39977
160
3.1
158
83
6
595
30
26
14
29
1.95
41290--41395
16
6.7
16
71
20
64
5
20
0
72
1.10
41289--41344
14
4.0
14
78
13
62
5
17
1
75
1.09
41356--41436
10
7.6
10
74
20
51
7
16
0
76
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41289--41369
14
5.3
16
70
24
59
6
19
1
72
1.12
41303--41437
9
14.8
9
69
23
54
7
18
0
73
1.11
56069--56110
17
2.6
16
82
10
59
69
0
28
2
1.01
61035--61114
40
2.0
40
87
4
117
16
22
27
33
1.95
63383--63482
48
2.1
48
90
0
155
20
15
40
25
1.90
77109--77186
39
2.0
39
100
0
156
23
12
23
41
1.88
80021--80079
7
8.4
7
82
14
68
62
0
0
37
0.95

Tables:   1

The End!