Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000606.1 Hibiscus syriacus cultivar Beakdansim tig00001178_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77263

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8120--8172
3
17.7
3
100
0
106
67
0
0
32
0.91
9056--9123
34
2.0
34
100
0
136
55
8
17
17
1.66
21534--21576
20
2.2
20
91
0
68
34
20
11
32
1.89
23290--23327
16
2.5
15
84
12
51
28
5
0
65
1.14
26255--26290
18
2.0
18
100
0
72
55
22
5
16
1.62
26648--26683
14
2.6
15
83
16
51
47
27
19
5
1.72
28222--28319
21
4.7
20
85
8
117
23
21
33
21
1.97
28610--28666
21
2.7
21
86
5
80
35
29
12
22
1.91
30463--30506
20
2.2
20
87
0
61
13
13
20
52
1.74
32095--32455
6
60.8
6
97
2
676
32
0
16
49
1.50
33003--33039
20
1.9
19
89
10
58
45
10
24
18
1.81
33186--33256
37
1.9
37
85
0
97
47
4
1
46
1.30
36753--36865
35
3.2
37
88
5
162
43
20
3
32
1.69
36804--36864
21
3.2
21
65
29
64
42
21
3
32
1.69
41346--41455
35
3.1
35
82
3
123
46
17
1
34
1.59
57659--57771
31
3.6
31
78
2
109
34
7
12
45
1.71

Tables:   1

The End!