Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000607.1 Hibiscus syriacus cultivar Beakdansim tig00001180_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83732

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12349--12398
26
1.9
25
87
0
64
42
22
6
30
1.77
14318--14365
24
2.0
24
91
0
78
56
20
8
14
1.64
14601--14653
16
3.1
16
75
19
61
62
3
0
33
1.13
14595--14646
20
2.5
20
84
9
59
65
1
0
32
1.04
15396--15464
23
3.0
23
84
0
84
28
27
24
18
1.98
25892--25934
23
1.9
23
90
4
70
55
9
16
18
1.67
25899--25944
23
2.0
24
84
16
62
50
8
19
21
1.75
25970--25998
12
2.5
12
94
5
51
86
6
6
0
0.72
28742--28779
19
2.0
20
84
5
51
26
5
2
65
1.27
31004--31154
60
2.5
60
84
4
189
27
17
7
46
1.76
45023--45235
103
2.1
103
96
0
390
26
14
23
36
1.93
45252--45319
23
3.0
23
91
0
100
20
27
26
25
1.99
45649--45679
12
2.6
12
100
0
62
22
0
35
41
1.54
45654--45702
16
3.0
16
72
3
53
28
2
28
40
1.68
48829--48931
30
3.4
31
81
9
122
37
6
10
44
1.66
65443--65502
25
2.4
25
97
0
111
13
21
10
55
1.67
65740--65861
61
2.0
61
98
0
235
27
8
12
52
1.67

Tables:   1

The End!