Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006070.1 Hibiscus syriacus cultivar Beakdansim tig00014355_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60152

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6947--6990
21
2.1
21
91
0
70
22
22
25
29
1.99
13153--13184
15
2.1
16
94
5
57
65
0
9
25
1.22
19039--19111
31
2.4
31
90
4
112
28
17
13
39
1.88
19069--19157
30
2.9
30
78
5
81
29
16
17
35
1.93
19463--19498
18
1.9
19
88
5
56
44
2
13
38
1.59
21550--21594
9
5.0
9
83
0
63
55
0
11
33
1.35
21550--21600
18
2.8
18
84
0
66
54
0
11
33
1.37
21566--21608
6
7.3
6
80
15
54
55
0
13
30
1.39
28253--28440
54
3.5
54
83
2
243
29
19
19
31
1.96
36736--36761
2
13.0
2
100
0
52
50
0
0
50
1.00
39897--39952
2
28.0
2
100
0
112
50
0
0
50
1.00
42492--42536
21
2.1
21
91
0
72
33
6
6
53
1.53
42533--42648
51
2.3
50
94
2
198
48
6
5
39
1.52
42623--42661
2
19.0
2
94
5
69
48
0
2
48
1.15
45643--45766
25
5.0
25
96
2
216
28
15
20
36
1.93
45885--45948
3
22.0
3
78
12
71
67
1
3
28
1.15
45887--45950
32
2.0
32
90
6
103
65
3
4
26
1.27
46153--46362
89
2.4
91
87
3
293
24
18
29
27
1.98
46128--46363
43
5.3
43
70
13
165
24
17
30
27
1.97
46242--46488
135
1.9
134
85
8
353
25
19
28
25
1.99
47450--47474
13
1.9
13
100
0
50
12
16
0
72
1.13
48722--48757
17
2.1
17
100
0
72
36
16
25
22
1.94

Tables:   1

The End!