Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006078.1 Hibiscus syriacus cultivar Beakdansim tig00014397_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65052

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1770--1815
15
3.0
15
93
6
83
60
6
19
13
1.54
1770--1816
16
3.0
16
96
3
87
61
6
19
12
1.52
4182--4229
18
2.6
18
93
3
78
22
2
2
72
1.05
4538--4593
19
2.6
21
78
18
62
26
23
16
33
1.95
7801--7856
19
2.8
20
74
17
62
46
17
0
35
1.49
7883--7910
2
14.0
2
100
0
56
50
0
0
50
1.00
8673--8730
20
2.7
20
81
10
62
31
22
15
31
1.95
8826--8881
21
2.7
21
100
0
112
32
21
19
26
1.97
11770--11803
13
2.5
13
95
4
59
20
8
29
41
1.82
15332--15374
3
14.3
3
95
0
77
32
0
2
65
1.06
16896--17009
35
3.2
35
93
2
192
42
2
6
49
1.41
18124--18614
267
1.8
267
99
0
964
27
20
13
39
1.89
20465--20493
2
14.5
2
100
0
58
51
0
0
48
1.00
20491--20515
3
8.3
3
100
0
50
68
0
0
32
0.90
26240--26266
14
1.9
14
100
0
54
55
0
37
7
1.28
26444--26478
17
1.9
19
88
11
56
31
8
34
25
1.86
36528--36589
18
3.2
20
78
19
62
61
0
1
37
1.06
36584--36738
63
2.5
63
89
6
228
57
1
1
39
1.18
36584--36678
13
7.4
12
70
18
59
55
1
2
41
1.18
36700--36750
12
4.4
11
80
9
57
66
1
0
31
1.03
37619--37656
20
1.9
20
94
0
67
31
18
26
23
1.97
37710--37761
20
2.6
20
78
6
61
25
9
30
34
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40141--40230
3
30.3
3
97
2
173
0
0
33
66
0.92
41400--41433
16
2.0
18
88
11
54
26
2
5
64
1.30
41899--42146
130
1.9
130
93
0
424
36
12
14
36
1.85
42543--42618
35
2.2
35
95
0
134
36
1
22
39
1.63
43112--43170
31
1.9
30
89
3
91
50
1
5
42
1.34
59935--59964
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!