Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006087.1 Hibiscus syriacus cultivar Beakdansim tig00014433_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67552

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8930--8997
23
3.0
23
88
0
91
20
26
26
26
1.99
13883--13937
26
2.2
26
86
3
76
52
1
0
45
1.11
16901--16981
25
3.1
25
78
20
76
70
2
0
27
1.00
16940--16977
20
1.9
19
94
5
67
68
2
0
28
1.03
29219--29291
31
2.4
31
84
9
87
42
5
15
36
1.70
33292--33346
25
2.2
26
96
3
103
58
5
7
29
1.48
46061--46183
50
2.5
50
79
2
149
22
26
34
16
1.95
51945--52237
83
3.6
79
77
4
253
31
14
21
32
1.93
51935--52237
41
7.3
41
67
12
136
30
14
22
32
1.94
52380--52516
41
3.3
41
81
6
145
31
21
18
27
1.97
52485--52580
42
2.3
42
81
1
104
23
15
22
37
1.93
52508--52604
42
2.3
42
85
3
124
23
17
22
36
1.95
56639--56688
22
2.4
21
81
18
61
64
4
0
32
1.12
56645--56689
22
2.1
22
88
12
67
64
4
0
31
1.13
56670--56757
37
2.4
37
96
0
158
65
4
2
27
1.23
56679--56744
22
3.3
22
70
27
74
63
6
3
27
1.32
56685--56750
20
3.5
20
72
19
77
66
6
3
24
1.28
56702--56782
19
4.6
16
72
23
56
66
3
3
25
1.25
58037--58073
2
18.5
2
100
0
74
51
0
0
48
1.00
58088--58114
13
2.1
13
100
0
54
85
0
0
14
0.61
58271--58790
73
7.0
73
91
2
826
32
20
19
27
1.97
59451--59505
22
2.5
22
96
0
101
40
14
10
34
1.81

Tables:   1

The End!