Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006090.1 Hibiscus syriacus cultivar Beakdansim tig00014440_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74588

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1241--1356
16
7.2
16
68
17
62
56
2
0
40
1.13
1238--1282
21
2.3
19
88
7
63
62
0
0
37
0.96
1255--1317
15
4.1
15
74
13
56
53
1
0
44
1.10
1307--1351
21
2.1
22
84
12
58
60
4
0
35
1.17
18587--18709
44
2.6
45
89
8
176
30
12
14
43
1.82
18628--18728
51
2.0
51
90
0
157
28
10
15
44
1.81
23958--23992
18
1.9
18
94
0
61
22
17
45
14
1.84
41370--41419
21
2.4
21
83
12
75
38
20
16
26
1.92
42650--42981
167
2.0
168
96
1
612
39
16
13
30
1.87
47429--47491
31
2.0
31
100
0
126
30
28
9
31
1.89
50721--50763
22
2.0
22
90
0
68
39
9
4
46
1.57
60860--60921
31
2.0
31
93
6
108
58
27
4
9
1.50
63779--63829
15
3.4
15
83
0
75
37
3
19
39
1.70
63773--63844
30
2.4
30
97
2
137
41
2
20
34
1.67
63854--63887
14
2.4
14
90
0
50
38
14
14
32
1.87
64065--64129
30
2.1
32
81
13
75
46
0
6
47
1.27
64265--64356
26
3.7
25
70
17
75
50
1
1
47
1.15
64322--64362
15
2.9
15
78
10
50
53
0
0
46
1.00
64323--64365
13
3.1
14
83
9
61
55
0
0
44
0.99
64323--64380
18
3.2
19
75
15
61
56
0
0
43
0.99
64546--64649
42
2.5
42
90
3
156
48
16
16
19
1.82
64969--65003
13
2.7
13
100
0
70
25
57
17
0
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65407--65579
86
2.0
86
97
1
328
39
8
12
39
1.72
68906--68979
31
2.4
31
86
4
96
50
13
6
29
1.67

Tables:   1

The End!