Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000610.1 Hibiscus syriacus cultivar Beakdansim tig00001184_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58289

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6295--6327
16
2.1
16
88
11
50
48
0
0
51
1.00
7888--7957
35
1.9
38
86
13
103
51
2
0
45
1.16
8689--8722
17
2.0
17
88
11
52
41
2
0
55
1.15
9020--9145
67
1.9
64
85
7
173
37
11
5
46
1.63
12570--12598
15
1.9
15
100
0
58
34
0
10
55
1.34
14516--14550
18
1.9
18
100
0
70
25
34
22
17
1.96
21324--21358
18
1.9
18
94
0
61
25
34
20
20
1.96
24926--24965
15
2.7
15
96
0
71
15
25
12
47
1.80
27339--27378
21
2.0
20
85
5
53
30
12
17
40
1.86
31282--31321
21
1.9
21
89
0
62
10
25
40
25
1.86
31304--31363
19
2.9
20
85
9
68
16
26
35
21
1.95
40652--40682
12
2.6
12
89
0
53
29
0
0
70
0.87
40784--40815
16
2.0
16
93
0
55
28
25
12
34
1.92
42774--42805
5
6.4
5
100
0
64
56
0
0
43
0.99
46098--46148
23
2.2
22
80
10
57
23
29
23
23
1.99
51807--51843
18
2.0
19
89
5
58
48
0
0
51
1.00

Tables:   1

The End!