Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006100.1 Hibiscus syriacus cultivar Beakdansim tig00014457_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61461

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1036--1076
20
2.0
22
85
9
59
24
19
17
39
1.92
1637--1691
28
1.9
29
85
3
76
25
14
12
47
1.80
3013--3115
30
3.4
30
90
0
161
34
22
17
25
1.95
16084--16109
7
3.7
7
100
0
52
53
15
0
30
1.42
19496--19670
27
6.5
27
95
0
305
30
17
13
38
1.89
19725--19777
22
2.4
22
100
0
106
33
18
20
26
1.96
25986--26083
44
2.1
47
88
7
148
27
11
21
39
1.87
35724--35855
18
7.9
16
71
22
69
71
0
20
6
1.13
35724--35856
26
5.2
25
71
24
75
72
0
20
6
1.12
35740--35804
34
1.9
34
84
6
87
70
1
21
6
1.17
35775--35823
19
2.6
19
78
12
55
73
0
22
4
1.00
35812--35853
7
5.7
7
83
10
57
76
0
14
9
1.02
35720--35854
25
5.5
22
76
20
85
71
0
20
7
1.14
35730--35854
8
14.9
8
68
26
64
71
0
20
7
1.15
37030--37388
51
6.8
51
85
6
423
28
15
27
28
1.96
37038--37609
55
10.6
56
85
5
553
28
16
25
29
1.97

Tables:   1

The End!