Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006101.1 Hibiscus syriacus cultivar Beakdansim tig00014460_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70759

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8783--8810
13
2.2
13
100
0
56
28
7
28
35
1.84
9120--9179
2
30.0
2
100
0
120
50
0
0
50
1.00
9662--9686
2
12.5
2
100
0
50
52
0
0
48
1.00
9686--9773
23
3.9
23
82
2
108
86
1
10
2
0.72
9686--9773
1
88.0
1
73
0
68
86
1
10
2
0.72
11610--12177
284
2.0
283
96
0
1037
38
6
16
37
1.76
13485--13646
40
4.1
40
95
0
288
24
16
25
33
1.96
13754--13862
45
2.4
46
86
6
143
35
10
23
30
1.88
14564--14655
39
2.4
39
87
7
125
38
15
1
45
1.53
14921--14980
30
2.0
30
83
6
77
35
20
18
26
1.95
20384--20426
3
13.7
3
85
9
59
62
0
0
37
0.95
20388--20438
25
2.0
25
92
3
84
58
0
0
41
0.98
20394--20433
20
2.0
20
100
0
80
60
0
0
40
0.97
20622--20713
36
2.6
36
98
0
175
27
25
16
31
1.96
20821--20893
20
3.7
20
86
0
110
32
19
19
28
1.96
20821--20899
40
2.0
39
92
2
131
31
17
22
27
1.97
27649--27688
19
2.0
20
90
4
64
20
15
0
65
1.28
28461--28638
90
2.0
90
94
0
311
44
6
11
37
1.65
35145--35319
90
2.0
89
91
1
287
46
6
10
36
1.64
43574--43645
3
22.7
3
83
10
90
59
0
0
40
0.97
43585--43666
23
3.4
23
93
6
128
56
0
0
43
0.99
43582--43666
26
3.3
26
88
11
124
56
0
0
43
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46308--46366
29
2.0
31
80
12
70
44
15
3
37
1.63
58026--58056
13
2.3
14
94
5
55
16
3
12
67
1.35
58560--58597
20
1.9
20
94
0
67
52
13
18
15
1.74
59109--59159
26
1.9
26
84
4
66
47
17
3
31
1.66
59349--59466
60
2.0
60
84
3
157
31
13
13
41
1.83
60676--60787
35
3.2
35
87
0
152
41
21
0
36
1.60
60783--60857
35
2.1
35
82
4
89
34
0
21
44
1.53
64286--64323
20
1.9
20
88
0
58
23
21
26
28
1.99
64357--64443
20
4.2
20
71
10
68
33
16
17
33
1.92
64397--64443
20
2.3
21
88
3
69
31
17
17
34
1.92
70206--70285
24
3.5
24
74
19
80
32
17
18
31
1.94
70492--70521
14
2.1
14
100
0
60
23
13
13
50
1.77
70645--70685
18
2.2
18
86
8
55
56
4
4
34
1.42

Tables:   1

The End!