Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006102.1 Hibiscus syriacus cultivar Beakdansim tig00014461_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65298

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4627--4680
12
4.6
12
79
4
65
12
16
46
24
1.82
4698--4781
42
2.0
41
81
9
98
46
0
0
53
1.00
4782--4817
12
2.9
12
91
4
54
11
16
52
19
1.73
17639--17677
21
1.9
20
84
5
51
46
2
5
46
1.38
18996--19021
13
2.0
13
100
0
52
23
7
0
69
1.14
27486--27570
3
28.7
3
90
2
136
64
1
2
31
1.13
27877--28402
114
4.6
114
97
0
948
29
19
12
38
1.89
29092--30055
83
11.6
83
96
0
1608
35
22
14
27
1.93
31091--31169
17
4.4
17
80
13
95
0
16
0
83
0.65
31093--31168
38
2.0
39
89
2
118
0
17
0
82
0.66
31090--31174
14
6.1
14
74
20
72
0
18
0
81
0.70
31091--31169
26
2.9
26
80
17
97
0
16
0
83
0.65
43861--43941
3
27.0
3
92
0
135
64
1
2
32
1.15
44182--44220
19
2.0
20
90
5
62
38
5
2
53
1.37
46970--47063
40
2.3
41
92
5
156
37
13
23
25
1.92
57386--57419
17
2.0
17
100
0
68
35
0
41
23
1.55
61514--61557
22
2.0
22
90
0
70
6
0
34
59
1.24
61559--61601
9
4.8
9
100
0
86
23
0
30
46
1.52
61865--61898
12
2.7
13
86
9
52
44
8
5
41
1.60
61992--62035
20
2.2
20
88
4
63
36
4
4
54
1.41

Tables:   1

The End!