Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006106.1 Hibiscus syriacus cultivar Beakdansim tig00014471_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74729

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5538--5562
12
2.1
12
100
0
50
16
16
8
60
1.58
9402--9431
16
1.9
15
93
6
51
76
0
3
20
0.92
11127--11314
84
2.2
84
82
3
218
24
18
24
32
1.97
11415--11655
102
2.4
102
82
3
270
40
14
18
27
1.89
12866--12961
32
2.9
33
84
4
131
37
19
12
30
1.89
12866--12961
33
2.9
32
85
3
129
37
19
12
30
1.89
13893--14025
69
1.9
69
92
3
223
26
13
23
36
1.92
23746--23845
50
2.0
50
100
0
200
46
16
14
24
1.83
27922--27997
36
2.1
36
97
0
143
43
14
10
31
1.79
47916--48037
61
2.0
61
100
0
244
26
22
6
44
1.77
51228--51253
12
2.2
12
100
0
52
15
42
0
42
1.47
54452--54512
31
2.0
31
96
0
113
27
16
9
45
1.79
67425--67489
34
1.9
34
100
0
130
53
13
7
24
1.66
69473--69597
43
2.9
43
82
0
142
37
21
10
30
1.87

Tables:   1

The End!