Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006111.1 Hibiscus syriacus cultivar Beakdansim tig00014485_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49752

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
320--374
20
2.8
20
91
0
92
25
18
21
34
1.96
1719--2170
57
8.0
57
92
1
718
32
11
21
34
1.89
1719--2170
113
4.0
114
91
2
718
32
11
21
34
1.89
1719--2170
170
2.7
169
91
4
707
32
11
21
34
1.89
16378--16486
53
2.1
53
82
0
128
34
11
18
35
1.86
21955--21993
3
13.0
3
100
0
78
0
33
0
66
0.92
21992--22031
3
13.3
3
89
0
62
30
35
2
32
1.71
23671--23703
11
2.9
12
86
13
52
66
9
0
24
1.20
26247--26276
14
2.1
14
100
0
60
33
6
20
40
1.78
33721--33785
28
2.2
28
86
5
85
47
1
3
47
1.27
33713--33785
30
2.5
29
82
8
87
47
1
2
47
1.24
33909--33966
29
2.0
29
89
3
89
62
1
1
34
1.16
36883--36918
16
2.2
16
90
0
54
27
0
0
72
0.85
37113--37168
24
2.2
25
81
6
69
39
8
0
51
1.33
37120--37167
26
1.9
25
87
8
71
39
8
0
52
1.32
37103--37169
24
2.7
25
75
15
68
40
7
0
52
1.30
37142--37274
29
4.5
29
79
6
142
40
7
0
51
1.36
37139--37274
59
2.3
59
82
2
166
39
7
0
52
1.35
37321--37383
26
2.4
26
79
12
74
44
1
11
42
1.49
37297--37588
30
10.6
28
70
17
128
51
0
8
39
1.35
37432--37487
25
2.3
25
84
9
71
51
0
5
42
1.24
37384--37582
54
3.6
54
71
17
142
52
0
8
39
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37504--37585
27
3.0
27
79
13
105
54
0
6
39
1.25
37506--37587
25
3.2
23
66
30
58
54
0
7
37
1.28
37885--37915
16
1.9
16
100
0
62
25
19
16
38
1.92

Tables:   1

The End!