Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01006115.1 Hibiscus syriacus cultivar Beakdansim tig00014491_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 61440
ACGTcount: A:0.33, C:0.15, G:0.19, T:0.32
Found at i:1384 original size:23 final size:23
Alignment explanation
Indices: 1357--1415 Score: 91
Period size: 23 Copynumber: 2.6 Consensus size: 23
1347 CATTATTATA
*
1357 TGGCACTATGGTGCAATTCTACG
1 TGGCACTACGGTGCAATTCTACG
1380 TGGCACTACGGTGCAATTCTACG
1 TGGCACTACGGTGCAATTCTACG
* *
1403 CGGCACTTCGGTG
1 TGGCACTACGGTG
1416 TATATACGAG
Statistics
Matches: 33, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
23 33 1.00
ACGTcount: A:0.19, C:0.25, G:0.29, T:0.27
Consensus pattern (23 bp):
TGGCACTACGGTGCAATTCTACG
Found at i:2538 original size:16 final size:16
Alignment explanation
Indices: 2517--2547 Score: 62
Period size: 16 Copynumber: 1.9 Consensus size: 16
2507 CTTTTGAATT
2517 TTTTTCGAGTTCGAGC
1 TTTTTCGAGTTCGAGC
2533 TTTTTCGAGTTCGAG
1 TTTTTCGAGTTCGAG
2548 TCGAGTTTCA
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 15 1.00
ACGTcount: A:0.13, C:0.16, G:0.26, T:0.45
Consensus pattern (16 bp):
TTTTTCGAGTTCGAGC
Found at i:2961 original size:6 final size:6
Alignment explanation
Indices: 2950--2976 Score: 54
Period size: 6 Copynumber: 4.5 Consensus size: 6
2940 GATCTAAATA
2950 AAATTT AAATTT AAATTT AAATTT AAA
1 AAATTT AAATTT AAATTT AAATTT AAA
2977 CGACAACAGG
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
6 21 1.00
ACGTcount: A:0.56, C:0.00, G:0.00, T:0.44
Consensus pattern (6 bp):
AAATTT
Found at i:5415 original size:37 final size:37
Alignment explanation
Indices: 5339--5415 Score: 102
Period size: 36 Copynumber: 2.1 Consensus size: 37
5329 TTTTTATATT
* * *
5339 TTTAATTTTTTTTTAAAAATTATATAAATATTATGAA
1 TTTAATTTTTTTTAAAAAAATATATAAATATTATCAA
*
5376 TTTAA-TTTTTTTAAAAAAATATATAAATATTTTACAA
1 TTTAATTTTTTTTAAAAAAATATATAAATATTAT-CAA
5413 TTT
1 TTT
5416 GTAATATTAT
Statistics
Matches: 35, Mismatches: 4, Indels: 2
0.85 0.10 0.05
Matches are distributed among these distances:
36 25 0.71
37 10 0.29
ACGTcount: A:0.44, C:0.01, G:0.01, T:0.53
Consensus pattern (37 bp):
TTTAATTTTTTTTAAAAAAATATATAAATATTATCAA
Found at i:11971 original size:17 final size:17
Alignment explanation
Indices: 11945--11986 Score: 75
Period size: 17 Copynumber: 2.5 Consensus size: 17
11935 TATTATAATC
*
11945 AGTCTCGACTTGTGATA
1 AGTCTAGACTTGTGATA
11962 AGTCTAGACTTGTGATA
1 AGTCTAGACTTGTGATA
11979 AGTCTAGA
1 AGTCTAGA
11987 TTCAATATTT
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
17 24 1.00
ACGTcount: A:0.29, C:0.14, G:0.24, T:0.33
Consensus pattern (17 bp):
AGTCTAGACTTGTGATA
Found at i:12147 original size:30 final size:31
Alignment explanation
Indices: 12088--12151 Score: 103
Period size: 31 Copynumber: 2.1 Consensus size: 31
12078 GTTATATGAG
* *
12088 CTATGTGATAAAGGTATGGAAAATGATATGT
1 CTATGTGATAAAAGTATGGAAAATAATATGT
12119 CTATGTGATAAAAGTAT-GAAAATAATATGT
1 CTATGTGATAAAAGTATGGAAAATAATATGT
12149 CTA
1 CTA
12152 CGCGATATAA
Statistics
Matches: 31, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
30 15 0.48
31 16 0.52
ACGTcount: A:0.42, C:0.05, G:0.20, T:0.33
Consensus pattern (31 bp):
CTATGTGATAAAAGTATGGAAAATAATATGT
Found at i:12446 original size:23 final size:22
Alignment explanation
Indices: 12392--12447 Score: 58
Period size: 23 Copynumber: 2.4 Consensus size: 22
12382 CATACTATAT
*
12392 GTCATTACGGTGCAATTCTACGT
1 GTCATT-CGGTGCAATTCTACGC
* *
12415 GGCACTTCGGTGCATTTCTACGC
1 GTCA-TTCGGTGCAATTCTACGC
12438 GATCATTCGG
1 G-TCATTCGG
12448 GATAAATTCT
Statistics
Matches: 27, Mismatches: 4, Indels: 4
0.77 0.11 0.11
Matches are distributed among these distances:
23 23 0.85
24 4 0.15
ACGTcount: A:0.18, C:0.25, G:0.25, T:0.32
Consensus pattern (22 bp):
GTCATTCGGTGCAATTCTACGC
Found at i:13046 original size:19 final size:19
Alignment explanation
Indices: 13022--13077 Score: 94
Period size: 19 Copynumber: 2.9 Consensus size: 19
13012 AGTACTGTAA
13022 CAGTATTGTAGCAGGGTAG
1 CAGTATTGTAGCAGGGTAG
*
13041 CAGTATTGTAGCAGGATAG
1 CAGTATTGTAGCAGGGTAG
*
13060 CAGTACTGTAGCAGGGTA
1 CAGTATTGTAGCAGGGTA
13078 TCGGTACCTA
Statistics
Matches: 34, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
19 34 1.00
ACGTcount: A:0.29, C:0.12, G:0.34, T:0.25
Consensus pattern (19 bp):
CAGTATTGTAGCAGGGTAG
Found at i:13097 original size:20 final size:20
Alignment explanation
Indices: 13068--13109 Score: 75
Period size: 20 Copynumber: 2.1 Consensus size: 20
13058 AGCAGTACTG
*
13068 TAGCAGGGTATCGGTACCTA
1 TAGCAAGGTATCGGTACCTA
13088 TAGCAAGGTATCGGTACCTA
1 TAGCAAGGTATCGGTACCTA
13108 TA
1 TA
13110 ATAGGGGTAT
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
20 21 1.00
ACGTcount: A:0.29, C:0.19, G:0.26, T:0.26
Consensus pattern (20 bp):
TAGCAAGGTATCGGTACCTA
Found at i:13293 original size:21 final size:21
Alignment explanation
Indices: 13269--13314 Score: 65
Period size: 21 Copynumber: 2.2 Consensus size: 21
13259 TTATAACGAA
13269 CATAATTTAATAATATATTAT
1 CATAATTTAATAATATATTAT
* **
13290 CATATTTTCTTAATATATTAT
1 CATAATTTAATAATATATTAT
13311 CATA
1 CATA
13315 TTTTCTTAAT
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
21 22 1.00
ACGTcount: A:0.41, C:0.09, G:0.00, T:0.50
Consensus pattern (21 bp):
CATAATTTAATAATATATTAT
Found at i:13315 original size:21 final size:21
Alignment explanation
Indices: 13279--13326 Score: 96
Period size: 21 Copynumber: 2.3 Consensus size: 21
13269 CATAATTTAA
13279 TAATATATTATCATATTTTCT
1 TAATATATTATCATATTTTCT
13300 TAATATATTATCATATTTTCT
1 TAATATATTATCATATTTTCT
13321 TAATAT
1 TAATAT
13327 GAGTTCAAAT
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 27 1.00
ACGTcount: A:0.35, C:0.08, G:0.00, T:0.56
Consensus pattern (21 bp):
TAATATATTATCATATTTTCT
Found at i:15875 original size:18 final size:17
Alignment explanation
Indices: 15821--15869 Score: 53
Period size: 19 Copynumber: 2.7 Consensus size: 17
15811 TTGGACCCTT
* *
15821 AGTGCATCGGTGCACTAA
1 AGTGCATCGATGCA-TCA
15839 GAGTGCATCGATGCATCA
1 -AGTGCATCGATGCATCA
15857 AGTGCATTCGATG
1 AGTGCA-TCGATG
15870 TTTCAAAATA
Statistics
Matches: 27, Mismatches: 2, Indels: 3
0.84 0.06 0.09
Matches are distributed among these distances:
17 6 0.22
18 8 0.30
19 13 0.48
ACGTcount: A:0.27, C:0.20, G:0.29, T:0.24
Consensus pattern (17 bp):
AGTGCATCGATGCATCA
Found at i:16048 original size:65 final size:64
Alignment explanation
Indices: 15841--16050 Score: 246
Period size: 65 Copynumber: 3.2 Consensus size: 64
15831 TGCACTAAGA
* * * *
15841 GTGCATCGATGCATCAAGTGCATTCGATGTTTCA-AAATAGCCAGAGTGCATCGATGCATGGCTG
1 GTGCATCGATGCATCAAATGCATTCGATGTTTCATAAA-ATCCACAGTGCATCGATGCATGGTTG
*
15905 GTGCATCGATGCATCAAATGCATTCGATGTTTTCATAAAATCCGCAGTGCATCGATGCATGGTAT
1 GTGCATCGATGCATCAAATGCATTCGATG-TTTCATAAAATCCACAGTGCATCGATGCATGGT-T
15970 -
64 G
* ** **
15970 GTGCATCGATGCATGAAATGCATTCGATG-TTCAATTTAATCCATGGTGCATCGATGCATGGATT
1 GTGCATCGATGCATCAAATGCATTCGATGTTTC-ATAAAATCCACAGTGCATCGATGCATGG-TT
16034 G
64 G
* *
16035 GTGCGTCGGTGCATCA
1 GTGCATCGATGCATCA
16051 CTCTAAAAAT
Statistics
Matches: 126, Mismatches: 14, Indels: 11
0.83 0.09 0.07
Matches are distributed among these distances:
63 3 0.02
64 52 0.41
65 67 0.53
66 4 0.03
ACGTcount: A:0.26, C:0.20, G:0.25, T:0.30
Consensus pattern (64 bp):
GTGCATCGATGCATCAAATGCATTCGATGTTTCATAAAATCCACAGTGCATCGATGCATGGTTG
Found at i:16522 original size:2 final size:2
Alignment explanation
Indices: 16515--16555 Score: 82
Period size: 2 Copynumber: 20.5 Consensus size: 2
16505 AATTGATTAA
16515 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
16556 GCTTAAGCTG
Statistics
Matches: 39, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 39 1.00
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (2 bp):
AT
Found at i:20750 original size:14 final size:15
Alignment explanation
Indices: 20709--20743 Score: 61
Period size: 15 Copynumber: 2.3 Consensus size: 15
20699 AGGATCATGA
*
20709 GTTTCCTCATTTTTC
1 GTTTCCTTATTTTTC
20724 GTTTCCTTATTTTTC
1 GTTTCCTTATTTTTC
20739 GTTTC
1 GTTTC
20744 TTCTTTTGAT
Statistics
Matches: 19, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
15 19 1.00
ACGTcount: A:0.06, C:0.23, G:0.09, T:0.63
Consensus pattern (15 bp):
GTTTCCTTATTTTTC
Found at i:22599 original size:21 final size:21
Alignment explanation
Indices: 22575--22614 Score: 64
Period size: 21 Copynumber: 1.9 Consensus size: 21
22565 GAGTTTATTT
22575 TCATTTTTCA-ATTTTGAAACA
1 TCATTTTT-ATATTTTGAAACA
22596 TCATTTTTATATTTTGAAA
1 TCATTTTTATATTTTGAAA
22615 AACAATTTCT
Statistics
Matches: 18, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
20 1 0.06
21 17 0.94
ACGTcount: A:0.33, C:0.10, G:0.05, T:0.53
Consensus pattern (21 bp):
TCATTTTTATATTTTGAAACA
Found at i:24685 original size:65 final size:65
Alignment explanation
Indices: 24553--24764 Score: 209
Period size: 65 Copynumber: 3.2 Consensus size: 65
24543 GCACTAAGAT
* * *
24553 TGCATCGATGCATCAAGTGCATTCGATG-TTTCAAAATAGCCAGAGTGCATCGATGCATGGTTGG
1 TGCATCGATGCATCAAATGCATTCGATGTTTTCAAAATAGCCACAGTGCATCGATGCATGATTGG
* *
24617 TGCATCGATGCATCAAATGCATTCGATGTTTTCATAAA-ATCCTCAGTGCATCGATGCATGATAT
1 TGCATCGATGCATCAAATGCATTCGATGTTTTCA-AAATAGCCACAGTGCATCGATGCATGAT-T
24681 -G
64 GG
* ** ** **
24682 TGCATCGTCGATGCATGAAATGCATTCGATG--TTCAATTTAATTCATGGTGCATCGATGCATGG
1 TGCA---TCGATGCATCAAATGCATTCGATGTTTTCAAAAT-AGCCACAGTGCATCGATGCAT-G
24745 ATTGG
61 ATTGG
*
24750 TGCATCAATGCATCA
1 TGCATCGATGCATCA
24765 CTCTGAAAAA
Statistics
Matches: 124, Mismatches: 14, Indels: 19
0.79 0.09 0.12
Matches are distributed among these distances:
64 27 0.22
65 40 0.32
66 8 0.06
67 18 0.15
68 31 0.25
ACGTcount: A:0.27, C:0.19, G:0.23, T:0.31
Consensus pattern (65 bp):
TGCATCGATGCATCAAATGCATTCGATGTTTTCAAAATAGCCACAGTGCATCGATGCATGATTGG
Found at i:24753 original size:68 final size:66
Alignment explanation
Indices: 24557--24755 Score: 200
Period size: 68 Copynumber: 3.0 Consensus size: 66
24547 TAAGATTGCA
* *
24557 TCGATGCATCAAGTGCATTCGATGTTTCA-AAATAGC-CAGAGTGCATCGATGCATGG-TTGGTG
1 TCGATGCATCAAATGCATTCGATGTTTCATAAA-ATCTC--AGTGCATCGATGCATGGATTGGTG
24619 CA--
63 CATC
24621 TCGATGCATCAAATGCATTCGATGTTTTCATAAAATCCTCAGTGCATCGATGCAT-GATAT-GTG
1 TCGATGCATCAAATGCATTCGATG-TTTCATAAAAT-CTCAGTGCATCGATGCATGGAT-TGGTG
24684 CATC
63 CATC
* **
24688 GTCGATGCATGAAATGCATTCGATG-TTCAATTTAAT-TCATGGTGCATCGATGCATGGATTGGT
1 -TCGATGCATCAAATGCATTCGATGTTTC-ATAAAATCTCA--GTGCATCGATGCATGGATTGGT
24751 GCATC
62 GCATC
24756 AATGCATCAC
Statistics
Matches: 116, Mismatches: 5, Indels: 24
0.80 0.03 0.17
Matches are distributed among these distances:
64 24 0.21
65 30 0.26
66 8 0.07
67 21 0.18
68 33 0.28
ACGTcount: A:0.27, C:0.19, G:0.23, T:0.32
Consensus pattern (66 bp):
TCGATGCATCAAATGCATTCGATGTTTCATAAAATCTCAGTGCATCGATGCATGGATTGGTGCAT
C
Found at i:29156 original size:30 final size:31
Alignment explanation
Indices: 29100--29163 Score: 103
Period size: 31 Copynumber: 2.1 Consensus size: 31
29090 GTTATATGAG
* *
29100 CTATGTGATAAAGGTGTGGAAAATAATATGT
1 CTATGTGATAAAAGTATGGAAAATAATATGT
29131 CTATGTGATAAAAGTATGG-AAATAATATGT
1 CTATGTGATAAAAGTATGGAAAATAATATGT
29161 CTA
1 CTA
29164 CGCAATATAA
Statistics
Matches: 31, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
30 14 0.45
31 17 0.55
ACGTcount: A:0.41, C:0.05, G:0.22, T:0.33
Consensus pattern (31 bp):
CTATGTGATAAAAGTATGGAAAATAATATGT
Found at i:35611 original size:18 final size:18
Alignment explanation
Indices: 35585--35660 Score: 62
Period size: 18 Copynumber: 3.8 Consensus size: 18
35575 GGTTCTACGC
*
35585 GGTCATTCGGGACATAGT
1 GGTCCTTCGGGACATAGT
35603 GGTCCTTCGGGACATATGTGATATGT
1 GGTCCTTCGGGAC-------ATA-GT
*
35629 GGTCCTTTGGGACATAGT
1 GGTCCTTCGGGACATAGT
35647 GGTCCTTCGGGACA
1 GGTCCTTCGGGACA
35661 AATTCTACGC
Statistics
Matches: 47, Mismatches: 3, Indels: 16
0.71 0.05 0.24
Matches are distributed among these distances:
18 27 0.57
19 3 0.06
25 3 0.06
26 14 0.30
ACGTcount: A:0.18, C:0.18, G:0.33, T:0.30
Consensus pattern (18 bp):
GGTCCTTCGGGACATAGT
Found at i:59135 original size:21 final size:20
Alignment explanation
Indices: 59103--59141 Score: 51
Period size: 21 Copynumber: 1.9 Consensus size: 20
59093 TAATTATAGA
* *
59103 AAAAAATTATGTTTATTTTT
1 AAAAAATAATGTATATTTTT
59123 AAAAAATCAATGTATATTT
1 AAAAAAT-AATGTATATTT
59142 ATCTTTGAAA
Statistics
Matches: 16, Mismatches: 2, Indels: 1
0.84 0.11 0.05
Matches are distributed among these distances:
20 7 0.44
21 9 0.56
ACGTcount: A:0.46, C:0.03, G:0.05, T:0.46
Consensus pattern (20 bp):
AAAAAATAATGTATATTTTT
Found at i:60463 original size:14 final size:14
Alignment explanation
Indices: 60444--60471 Score: 56
Period size: 14 Copynumber: 2.0 Consensus size: 14
60434 CGCTGGGCAT
60444 CCGAGGCCATCCGA
1 CCGAGGCCATCCGA
60458 CCGAGGCCATCCGA
1 CCGAGGCCATCCGA
60472 GAGCATCCGA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 14 1.00
ACGTcount: A:0.21, C:0.43, G:0.29, T:0.07
Consensus pattern (14 bp):
CCGAGGCCATCCGA
Found at i:60552 original size:20 final size:20
Alignment explanation
Indices: 60458--60543 Score: 163
Period size: 20 Copynumber: 4.3 Consensus size: 20
60448 GGCCATCCGA
60458 CCGAGGCCATCCGAGAGCAT
1 CCGAGGCCATCCGAGAGCAT
*
60478 CCGAGGCCATCCGAGAGTAT
1 CCGAGGCCATCCGAGAGCAT
60498 CCGAGGCCATCCGAGAGCAT
1 CCGAGGCCATCCGAGAGCAT
60518 CCGAGGCCATCCGAGAGCAT
1 CCGAGGCCATCCGAGAGCAT
60538 CCGAGG
1 CCGAGG
60544 GAAGCCGAGC
Statistics
Matches: 64, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
20 64 1.00
ACGTcount: A:0.24, C:0.34, G:0.31, T:0.10
Consensus pattern (20 bp):
CCGAGGCCATCCGAGAGCAT
Found at i:60579 original size:10 final size:10
Alignment explanation
Indices: 60438--60577 Score: 100
Period size: 10 Copynumber: 13.3 Consensus size: 10
60428 CCAACACGCT
60438 GGGCATCCGA
1 GGGCATCCGA
*
60448 GGCCATCCGA
1 GGGCATCCGA
60458 CCGAGGCCATCCGA
1 --G-GG-CATCCGA
*
60472 GAGCATCCGA
1 GGGCATCCGA
*
60482 GGCCATCCGA
1 GGGCATCCGA
* *
60492 GAGTATCCGA
1 GGGCATCCGA
*
60502 GGCCATCCGA
1 GGGCATCCGA
*
60512 GAGCATCCGA
1 GGGCATCCGA
*
60522 GGCCATCCGA
1 GGGCATCCGA
*
60532 GAGCATCCGA
1 GGGCATCCGA
* *
60542 GGGAAGCCGA
1 GGGCATCCGA
*
60552 GCGAGCTATGCGA
1 G-G-GC-ATCCGA
*
60565 GGGAATCCGA
1 GGGCATCCGA
60575 GGG
1 GGG
60578 AAGCCGAGCG
Statistics
Matches: 98, Mismatches: 25, Indels: 14
0.72 0.18 0.10
Matches are distributed among these distances:
10 78 0.80
11 3 0.03
12 4 0.04
13 6 0.06
14 7 0.07
ACGTcount: A:0.24, C:0.31, G:0.35, T:0.10
Consensus pattern (10 bp):
GGGCATCCGA
Found at i:60676 original size:12 final size:12
Alignment explanation
Indices: 60659--60683 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
60649 TGTCATGCAA
60659 CACGTTCATTCT
1 CACGTTCATTCT
60671 CACGTTCATTCT
1 CACGTTCATTCT
60683 C
1 C
60684 TCTGTTTGAG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.16, C:0.36, G:0.08, T:0.40
Consensus pattern (12 bp):
CACGTTCATTCT
Found at i:60748 original size:29 final size:29
Alignment explanation
Indices: 60701--60814 Score: 221
Period size: 29 Copynumber: 4.0 Consensus size: 29
60691 GAGCAAGGGT
60701 AGGTCGCCC-GAGTGCATGGCGACCTACA
1 AGGTCGCCCGGAGTGCATGGCGACCTACA
60729 AGGTCGCCCGGAGTGCATGGCGACCTACA
1 AGGTCGCCCGGAGTGCATGGCGACCTACA
60758 AGGTCGCCCGGAGTGCATGGCGACCTACA
1 AGGTCGCCCGGAGTGCATGGCGACCTACA
60787 AGGTCGCCCGGAGTGCATGGCGACCTAC
1 AGGTCGCCCGGAGTGCATGGCGACCTAC
60815 GGCCAACACT
Statistics
Matches: 85, Mismatches: 0, Indels: 1
0.99 0.00 0.01
Matches are distributed among these distances:
28 9 0.11
29 76 0.89
ACGTcount: A:0.20, C:0.32, G:0.34, T:0.14
Consensus pattern (29 bp):
AGGTCGCCCGGAGTGCATGGCGACCTACA
Done.