Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006127.1 Hibiscus syriacus cultivar Beakdansim tig00014529_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52339

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4386--4422
15
2.6
15
91
8
60
45
24
0
29
1.53
4590--4631
18
2.3
18
87
0
57
30
33
19
16
1.94
9986--10039
21
2.6
22
80
16
62
31
14
11
42
1.81
15473--15514
15
2.8
15
88
0
66
40
9
16
33
1.81
22341--22402
22
2.8
23
81
13
78
59
0
3
37
1.13
24414--24457
22
2.0
22
90
0
70
40
9
13
36
1.76
25446--25543
36
2.7
36
88
0
133
25
18
16
39
1.91
25542--25577
3
12.0
3
88
11
56
2
30
0
66
1.06
27255--27311
23
2.5
22
76
15
62
35
0
5
59
1.20
27446--27496
17
2.9
17
80
14
50
25
3
0
70
1.04
27398--27530
22
5.8
22
68
24
71
25
6
1
66
1.23
27640--27668
2
14.5
2
100
0
58
48
0
0
51
1.00
37830--37877
13
3.8
12
79
17
53
77
2
18
2
0.97
37835--37877
18
2.4
18
88
7
61
76
2
20
0
0.89
37830--37877
6
7.7
6
82
15
53
77
2
18
2
0.97
38808--38923
43
2.7
43
81
2
128
31
25
16
27
1.96
39711--39761
21
2.5
20
81
6
57
45
5
5
43
1.52
41128--41177
19
2.7
18
85
11
66
18
8
0
74
1.06
41135--41177
12
3.6
12
85
14
54
16
6
0
76
0.99
51886--51927
19
2.2
19
95
0
75
28
21
19
30
1.97

Tables:   1

The End!