Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006130.1 Hibiscus syriacus cultivar Beakdansim tig00014534_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63599

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
410--452
22
2.0
23
81
9
54
37
6
9
46
1.63
2042--2172
45
2.9
45
90
3
212
37
7
22
32
1.83
6838--6876
13
2.9
13
81
7
51
30
0
43
25
1.55
6838--6877
14
2.9
14
85
3
55
32
0
42
25
1.55
10839--10882
13
3.5
13
79
14
56
2
20
2
75
1.03
14726--14841
61
1.9
61
87
0
169
31
25
18
25
1.97
18579--18604
12
2.2
12
100
0
52
26
7
7
57
1.54
21251--21286
17
2.1
18
89
5
56
47
16
8
27
1.75
31831--31878
21
2.3
21
96
0
87
39
12
12
35
1.81
33203--33243
21
2.0
21
90
0
64
36
26
17
19
1.94
35866--35919
2
27.0
2
96
0
99
48
0
1
50
1.11
39092--39145
22
2.5
22
82
11
67
62
3
3
29
1.29
40850--41818
136
7.1
135
80
5
819
27
20
17
34
1.95
42748--42814
6
10.7
6
87
4
53
16
7
0
76
1.01
42761--42799
17
2.2
17
86
4
51
12
12
0
74
1.08
42790--42814
7
3.6
7
100
0
50
24
0
0
76
0.80
46323--46350
14
2.0
14
100
0
56
64
0
14
21
1.29
49536--49579
21
2.0
22
86
4
63
61
4
4
29
1.36
56313--56537
114
2.0
116
88
5
341
33
10
8
47
1.68

Tables:   1

The End!