Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006131.1 Hibiscus syriacus cultivar Beakdansim tig00014541_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74000

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21297--21330
13
2.6
13
90
0
50
32
0
5
61
1.20
21912--21946
2
18.0
2
94
5
63
51
0
0
48
1.00
23681--23712
2
16.0
2
93
0
55
50
46
0
3
1.17
23712--23741
2
15.0
2
100
0
60
50
0
0
50
1.00
24620--24672
21
2.4
22
81
12
65
49
5
1
43
1.37
25221--25260
10
4.0
10
86
0
53
27
32
0
40
1.57
25272--25346
21
3.2
22
77
21
64
32
0
5
62
1.17
30419--30483
16
4.1
15
80
6
58
60
10
3
26
1.45
34381--34418
20
2.0
20
89
5
60
50
21
5
23
1.69
38909--38946
20
2.0
20
89
5
60
50
21
5
23
1.69
60879--60910
14
2.3
14
94
0
55
34
12
0
53
1.39
62272--62330
26
2.3
26
100
0
118
45
8
20
25
1.79
64520--64575
22
2.5
22
97
0
103
14
21
44
19
1.86
66099--66595
231
2.2
229
96
1
906
44
7
7
39
1.62
66871--66917
20
2.3
20
89
10
78
55
10
17
17
1.69
66663--67079
182
2.3
181
87
4
601
43
14
16
25
1.85
69258--69322
21
3.1
21
93
0
103
41
10
30
16
1.83
69354--69420
33
2.1
32
88
2
98
26
0
49
23
1.51
71178--71219
17
2.4
18
92
4
68
30
2
11
54
1.49
71310--73431
198
10.9
200
91
6
3522
35
14
17
31
1.91
71310--73431
196
10.9
199
91
6
3514
35
14
17
31
1.91

Tables:   1

The End!