Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006133.1 Hibiscus syriacus cultivar Beakdansim tig00014543_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44537

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
776--815
17
2.4
17
91
0
62
42
7
17
32
1.77
4422--4465
21
2.0
24
82
13
58
38
6
9
45
1.63
6063--6193
45
2.9
45
90
1
210
38
6
22
32
1.79
10831--10869
13
2.9
13
81
7
51
30
0
43
25
1.55
10831--10870
14
2.9
14
85
3
55
32
0
42
25
1.55
14853--14902
17
2.9
18
75
19
52
0
20
2
78
0.86
14855--14902
21
2.3
22
79
13
57
0
20
2
77
0.88
19074--19189
61
1.9
61
87
0
169
31
25
18
25
1.97
25755--25790
17
2.1
18
89
5
56
47
16
8
27
1.75
27083--27124
19
2.2
19
87
8
59
78
0
11
9
0.96
34807--34850
23
2.0
23
86
4
63
27
15
2
54
1.53
36726--36773
21
2.3
21
96
0
87
39
12
12
35
1.81
38096--38136
21
2.0
21
90
0
64
36
26
17
19
1.94
40730--40766
2
18.5
2
94
0
65
48
0
2
48
1.15

Tables:   1

The End!