Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006134.1 Hibiscus syriacus cultivar Beakdansim tig00014546_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73481

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15855--15932
36
2.2
36
92
0
129
15
28
17
38
1.91
15867--15940
36
2.1
36
89
0
112
17
25
20
36
1.94
20902--20944
10
4.3
10
81
0
50
13
2
16
67
1.33
27283--27331
6
8.5
6
88
4
57
20
0
0
79
0.73
27297--27352
3
18.7
3
81
7
69
32
0
0
67
0.91
27359--27413
26
2.1
26
83
6
67
41
30
16
10
1.83
29011--29057
23
2.1
22
84
4
58
40
0
0
59
0.97
29105--29159
23
2.3
26
81
12
73
41
3
0
54
1.18
31694--31732
14
2.8
14
85
11
53
17
17
5
58
1.56
35810--36022
114
1.9
114
91
2
347
33
14
20
31
1.92
36918--37080
76
2.2
77
80
7
183
33
18
19
28
1.96
38289--38343
22
2.5
22
87
0
83
34
14
14
36
1.87
38921--40015
76
14.4
76
96
0
2012
21
20
21
35
1.96
40145--40191
15
3.2
15
88
8
62
21
0
0
78
0.75
40151--40215
3
21.7
3
78
6
69
29
0
0
70
0.87
41875--41919
23
2.0
22
86
8
63
40
0
0
60
0.97
41969--42023
23
2.3
26
81
12
73
41
3
0
54
1.18
44543--44604
25
2.5
25
97
0
115
46
11
25
16
1.80
47724--47767
20
2.2
20
100
0
88
50
18
13
18
1.79
48973--49075
32
3.3
30
88
6
143
33
22
17
27
1.96
51310--51356
21
2.2
21
96
0
85
27
21
21
29
1.98
51317--51362
21
2.2
21
88
0
65
28
28
15
28
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62314--62358
22
2.0
22
100
0
90
44
4
28
22
1.72
62320--62367
22
2.2
22
88
0
69
50
6
25
18
1.70
70277--70330
19
2.8
19
97
0
99
20
22
35
22
1.96
70315--70412
46
2.2
45
83
5
117
30
20
19
29
1.97
73080--73158
23
3.6
22
77
5
97
27
24
22
25
2.00
73106--73177
21
3.4
21
75
9
67
23
22
25
29
1.99

Tables:   1

The End!