Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000614.1 Hibiscus syriacus cultivar Beakdansim tig00001191_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71745

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1440--1468
2
15.0
2
92
7
51
48
0
0
51
1.00
3759--3820
19
3.2
20
79
6
74
46
1
0
51
1.10
3814--3859
18
2.4
19
82
17
60
63
0
0
36
0.95
3826--3879
27
2.0
27
85
7
74
57
0
0
42
0.98
11309--11377
15
4.4
15
81
16
86
84
0
14
1
0.70
11309--11377
8
8.8
8
84
12
90
84
0
14
1
0.70
13352--13743
149
2.6
150
90
2
599
37
11
14
36
1.82
13739--13854
42
2.8
41
79
8
126
25
21
18
34
1.96
13973--14069
42
2.3
42
78
7
108
26
21
20
30
1.98
13594--14400
235
3.5
233
88
3
1151
31
15
17
35
1.91
14833--14867
15
2.4
14
90
4
52
37
0
0
62
0.95
25267--25317
15
3.4
15
75
20
61
13
25
0
60
1.33
25275--25328
15
3.3
18
69
28
57
14
24
0
61
1.34
25250--25329
30
2.7
30
94
0
133
15
23
0
61
1.34
43042--43176
28
4.9
28
68
12
109
41
10
19
28
1.84
43002--43176
81
2.2
80
91
1
278
39
10
21
28
1.87
44421--44450
13
2.4
13
94
5
53
26
30
0
43
1.55
48308--48362
24
2.3
24
81
3
76
16
5
7
70
1.28
49624--49677
28
1.9
28
92
0
90
42
9
18
29
1.81
49584--49758
81
2.2
80
90
1
269
39
9
21
30
1.84
49703--49758
28
2.0
28
92
0
94
44
8
16
30
1.78
51272--51306
15
2.3
15
95
0
61
20
28
34
17
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55724--55779
17
3.4
16
76
16
60
66
0
17
16
1.26
55981--56024
6
7.2
6
87
12
63
0
20
0
79
0.73
55981--56024
13
3.6
12
88
11
63
0
20
0
79
0.73
55981--56024
19
2.4
17
88
11
61
0
20
0
79
0.73
64846--64950
36
2.9
36
91
1
158
28
5
35
30
1.81
69019--69070
22
2.3
23
86
3
70
28
3
34
32
1.76
69021--69110
36
2.5
38
89
10
122
28
5
35
30
1.80

Tables:   1

The End!