Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006144.1 Hibiscus syriacus cultivar Beakdansim tig00014583_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73338

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12072--12117
18
2.6
18
92
0
74
19
13
10
56
1.66
16564--16588
2
12.5
2
100
0
50
48
0
0
52
1.00
20639--20718
35
2.3
34
79
12
83
53
10
10
26
1.65
23426--23495
12
5.8
12
76
6
70
51
18
14
15
1.77
23431--23518
24
3.7
24
82
0
104
47
18
12
21
1.81
23424--23532
48
2.3
48
85
3
139
47
17
14
20
1.82
23425--23532
24
4.5
24
74
4
85
47
17
14
20
1.83
28567--28628
12
5.3
11
74
14
52
51
17
14
16
1.76
28566--28628
24
2.6
24
82
0
72
52
17
14
15
1.75
33711--33777
24
2.8
24
81
0
80
50
17
14
16
1.78
33712--33773
12
5.3
11
74
14
52
51
17
14
16
1.76
37863--37903
18
2.3
18
91
4
66
63
2
4
29
1.28
38282--38346
29
2.2
29
86
0
85
47
10
10
30
1.73
43134--43326
60
3.2
58
78
11
174
32
23
5
37
1.79
44080--44127
19
2.5
19
86
6
62
31
31
16
20
1.95
44137--44213
19
3.8
20
81
5
84
46
16
18
18
1.84
44576--44662
20
4.3
20
77
2
93
24
18
9
48
1.77
44578--44664
41
2.2
40
85
2
111
25
17
9
48
1.76
44678--44764
20
4.3
20
86
2
113
17
11
26
44
1.82
47758--47816
29
2.0
29
96
0
109
30
8
25
35
1.86
67098--67834
252
2.9
252
91
5
1154
39
19
13
26
1.89

Tables:   1

The End!