Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000615.1 Hibiscus syriacus cultivar Beakdansim tig00001193_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61110

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1276--1332
30
1.9
30
85
7
80
77
3
12
7
1.10
1296--1320
11
2.3
11
100
0
50
84
0
16
0
0.63
1262--1332
30
2.4
30
79
9
76
77
4
9
8
1.11
2980--3325
105
3.3
105
86
2
473
29
24
13
33
1.93
4470--4500
5
6.2
5
100
0
62
61
0
0
38
0.96
9129--9169
20
2.1
19
86
4
55
43
2
2
51
1.28
9859--9886
2
14.0
2
100
0
56
50
0
0
50
1.00
10445--10470
2
13.0
2
100
0
52
50
0
0
50
1.00
28148--28193
20
2.3
20
82
10
60
28
2
2
67
1.14
34794--34818
2
12.5
2
100
0
50
48
0
0
52
1.00
43341--43448
54
1.9
56
87
5
157
27
27
14
29
1.95
48014--48098
37
2.3
37
83
2
100
38
10
15
35
1.82
48659--48687
11
2.5
12
94
5
51
44
20
20
13
1.85
51717--51755
18
2.1
19
85
4
53
38
0
0
61
0.96

Tables:   1

The End!